Xenorhabdus bovienii SS-2004: XBJ1_3421
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Entry
XBJ1_3421 CDS
T01186
Symbol
lysS
Name
(GenBank) lysine tRNA synthetase, constitutive
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
XBJ1_3421 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xbo01007
]
XBJ1_3421 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xbo03016
]
XBJ1_3421 (lysS)
Enzymes [BR:
xbo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
XBJ1_3421 (lysS)
Amino acid related enzymes [BR:
xbo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
XBJ1_3421 (lysS)
Transfer RNA biogenesis [BR:
xbo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
XBJ1_3421 (lysS)
Prokaryotic type
Other AARSs
XBJ1_3421 (lysS)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
CBJ82539
UniProt:
D3V4G0
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All DBs
Position
complement(3325049..3326563)
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AA seq
504 aa
AA seq
DB search
MSQQQQGAEQAPDLNNELKTRREKLVALRGNGIAFPNDFRRENISEDLHAKYDDKTQEEL
EALNIEVTVAGRMMTRRIMGKASFATLQDMGGRIQVYVSRDDLPEGIYNEQFKKWDLGDI
LGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLADQEMRYRQRYLDLISNDESR
KTFQIRSRIMAALRNFMVKKDFMEVETPMMQAIPGGASARPFTTHHNALDIDMYLRIAPE
LYLKRLVVGGFERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYQDLIVLTEELFRTL
TQEVLGTTLVKYGEQEFDFGKPFTKMSMKEAICKYRPETNIADLDDMDKAVAIAKSLGID
IEKSWGLGRIQCEIFEETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGR
EIGNGFSELNDAEDQAERFAEQVRHKDEGDDEAMFYDDDYVTALEHGLPPTAGLGIGIDR
MVMLFTDSHTIRDVILFPAMRPNK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacagcagcagggagctgaacaggctcctgatttaaataatgaactgaaaact
cgccgtgaaaaactggttgcactgcgcggcaacggtatcgcattcccaaatgattttcgt
cgtgaaaacatttctgaagatctgcatgcaaaatatgatgacaagactcaggaagaactg
gaagcgctgaacattgaagtgaccgtagcaggccgtatgatgactcgtcgtatcatgggc
aaggcatcctttgcgaccttgcaggacatgggaggacgtattcaggtttacgtttcccgt
gatgacctgccggaaggcatttataatgaacagttcaaaaaatgggatttgggtgacatt
ttaggcgctcgcggtaaattgtttaaaaccaaaacgggtgaactttccattcactgtact
gaactgcgcttgctgaccaaagcactgcgtccgctgccggataaattccacggcttggcg
gatcaggaaatgcgctaccgtcagcgttatttggatctgatctcgaatgacgaatcacgc
aagacattccagatccgttcccgcatcatggctgcattgcgtaacttcatggtcaaaaaa
gacttcatggaagttgaaactccaatgatgcaggcgatccctggcggagcgagtgcgcgc
ccatttactacgcaccacaacgcgctggacatcgatatgtacctgcgcattgcaccggaa
ctgtatctgaaacgtctggtagtgggtggttttgagcgcgttttcgaaatcaaccggaac
ttccgtaacgaaggtatttctccgcgtcataacccagagttcaccatgatggaactctac
atggcttatgcggattaccaagatctgatcgtactgaccgaagaactgttccgtactctg
actcaggaagtgctgggtactacgttggttaaatacggtgaacaagaattcgatttcggt
aagcctttcaccaaaatgtccatgaaagaagcgatctgcaaatatcgcccggaaaccaat
atcgcggatctggatgatatggataaagctgtcgctatcgcgaagtctcttggtattgat
attgaaaaaagttggggcttgggtcgtattcagtgtgaaatatttgaagaaactgctgaa
agccacctgattcaaccgactttcattactgaatacccagcagaagtttctccgctggca
cgccgtaatgatgataacccattcattacagaccgttttgaattctttatcggtggccgt
gaaattggtaacggcttctccgaactgaacgatgcagaagatcaggcagaacgttttgca
gagcaagttcgtcataaagatgaaggtgacgacgaagcgatgttctatgatgatgactac
gttactgcactggaacacggtttaccaccaacagcaggtttggggattggtatcgaccgt
atggttatgctgttcacggatagccataccatccgtgacgtgatcctgttcccagcaatg
cgcccgaataaataa
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