Xenorhabdus bovienii SS-2004: XBJ1_3434
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Entry
XBJ1_3434 CDS
T01186
Symbol
gcvP
Name
(GenBank) glycine cleavage complex protein P, glycine decarboxylase, PLP-dependent
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00260
Glycine, serine and threonine metabolism
xbo00630
Glyoxylate and dicarboxylate metabolism
xbo00670
One carbon pool by folate
xbo00785
Lipoic acid metabolism
xbo01100
Metabolic pathways
xbo01110
Biosynthesis of secondary metabolites
xbo01200
Carbon metabolism
Module
xbo_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
XBJ1_3434 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XBJ1_3434 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XBJ1_3434 (gcvP)
00670 One carbon pool by folate
XBJ1_3434 (gcvP)
Enzymes [BR:
xbo01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
XBJ1_3434 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
CBJ82552
UniProt:
D3V4H3
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All DBs
Position
complement(3336718..3339594)
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AA seq
958 aa
AA seq
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MTQTLIQLENQGEFTRRHIGSSAEQQKEMLATVGANSLDDLTNKIVPRDIALSEPPAVGE
GATEQQALAELKVMAGQNRRYQSYIGMGYAPSVLPPVILRNLLENPGWYTAYTPYQPEVS
QGRLEALLNFQQVTIDLTGLDLASASLLDEATAAAEAMAMAKRVSKLKGAERFFVADDIH
PQTLDVVRTRAETFGFEVIVDKAEKVLELEGVFGVLLQQVGTTGEVHDYSALITKLKEKK
IIVSVAADFMALVMLTAPGKQGADMVFGAAQRFGVPMGYGGPHAAFFACRDEFKRSMPGR
IIGVSRDAAGNRALRMAMQTREQHIRREKANSNICTSQVLLANIAGMYAVYHGAEGLKRI
AGRIHRLTDILATGLQKAGITLRHKTWFDTLTVEVADKTQVLVRAEKAQINLRTDILGAI
GVALSEKTSRDDLQTLFQVLTGSDAILDIDTLDNEMAAGSQSIPVSMLRNDDILMHDNFR
RYHSETDMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEIMPITWPEFTDMHPFCPPE
QAQGYHQLISQLSHWLVLLTGYDAVCMQPNSGAQGEYAGLLAIRRYYASRGEQHRHVCLI
PSSAHGTNPASAHMAGMTVVVVNCDKEGNIDLTDLHEKAEKHRGELACIMVTYPSTHGVY
EETIRQICDIIHQNGGQVYLDGANMNAQVGITTPGFIGADVSHLNLHKTFCIPHGGGGPG
MGPIGVKKHLAPFVPGHSVVEMDTVTTLGAVSAAPFGSASILPISWMYIRMMGAKGLKQA
SQVAILNANYIAARLKGAYEILYTGRDGYVAHECILDIRPLKDEFGISEMDIAKRLVDYG
FHAPTMSFPVAGTLMVEPTESESKVEIDRFIDAMLAIREEISNVAKGEWPLEDNPLVNAP
HVQAELVSDWEHAYSREIAVFPTVETKANKYWPTVKRLDDVYGDRNLHCSCAPIEDYR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgacccagacactaatccaacttgaaaatcaaggtgaattcactcgtcgccacattggt
tcttctgctgaacagcaaaaagagatgctggcgacagttggtgcaaattctcttgacgat
ctgacgaataaaatcgttcctcgtgatatcgcattgtcagagccacctgctgtaggcgaa
ggtgcgacagaacaacaggcgctggctgaactgaaagtgatggctggccagaacagacgt
tatcaatcttatatcggtatgggatatgcgccatcggtacttcctccggttattctgcgt
aatttgctggaaaatcctggctggtacacggcatataccccgtatcagccagaagtttcc
caaggccgtcttgaagccttactgaactttcagcaagttactattgatctcaccggattg
gatcttgcttctgcctcattactggatgaagccacggcggcggctgaagctatggcgatg
gcaaaacgggtcagtaagttgaaaggcgcagagcgcttctttgtggcggatgatattcat
ccacagacgctggacgttgttcgtacccgtgcagaaacctttggatttgaagtcattgtt
gataaagccgaaaaagtgctggaactggaaggtgtcttcggtgtcctgctacaacaggtt
ggtacaacaggcgaagttcatgactacagtgctctgattacgaagctgaaagagaaaaaa
attattgtcagtgtagcggcggattttatggcactggtcatgctgactgcaccgggcaaa
caaggtgctgacatggtatttggtgcagcacagcgttttggtgtcccgatgggatacggt
ggcccacatgctgcattctttgcctgccgtgatgaattcaagcgttccatgccgggtcgc
attattggcgtttcccgtgacgctgcgggtaaccgggctctgcggatggctatgcagacc
cgtgaacagcatattcgtcgcgaaaaagcgaattccaatatttgtacctcgcaagttctg
ctggctaatattgctggcatgtacgcggtttaccacggtgctgaaggcttgaagagaatc
gctggccgtattcaccgattgaccgacattctggccaccggcctgcaaaaagcgggcatc
acactgcgtcacaaaacatggtttgatacgctgaccgttgaagttgcagataaaacacag
gtactggttcgggcggagaaagcccaaattaacctgcgtactgatattcttggtgcgatt
ggtgtggcattgagtgaaaaaaccagccgcgacgacttgcaaacactgttccaggttctg
actggctctgatgctatattggatattgatacgcttgataacgaaatggcggcaggcagc
caatctattccggtttcaatgttgcgcaatgatgacatcttgatgcatgacaacttccgc
cgttatcacagcgaaactgacatgatgcgctacatgcacagtctggagcgtaaagatctg
gcattgaatcaggcgatgatcccgctgggctcatgtaccatgaaactgaatgcggcggct
gaaattatgccgatcacatggcctgaattcacggatatgcaccctttctgtccaccagag
caggcgcagggttatcaccaactgatcagccaactctctcattggctggtattgctgact
ggctacgacgcagtttgtatgcagccaaactccggtgctcagggagaatatgctggctta
ctcgccattcgtcgttattacgccagtcgtggagaacaacatcgccatgtctgcttgatt
ccaagctctgctcacggcacaaaccctgcttccgcgcatatggcgggtatgaccgtggtg
gtggtgaattgtgacaaagaaggtaatatcgatctgacagatttacacgaaaaagcggaa
aaacatcgtggtgaactggcctgtatcatggtgacctacccatcgactcacggtgtgtat
gaagaaaccatccgtcagatctgcgatattattcaccagaatggaggccaggtttacctt
gatggtgccaacatgaacgcccaagtcggcattactacgccgggctttattggtgctgac
gtttcccacctgaacctgcataaaaccttttgtatcccacacggtggtggtggccctggc
atggggccgattggtgtgaaaaaacaccttgcaccatttgtaccggggcattccgtggtg
gaaatggacacagtaaccacattgggcgcagtatcagccgcaccatttggcagtgcttcc
attttgcccattagctggatgtatatccgtatgatgggagcaaaaggactgaaacaagcc
agccaagttgcgatcctgaatgcgaactacatcgcagctcgcctgaaaggggcttatgaa
atcctctataccgggcgtgatggctacgttgcccacgaatgtattctggatattcgccca
ctgaaagacgaatttggcatcagcgaaatggatatcgctaagcgtttggttgactacggc
ttccatgcaccaaccatgtcattcccagtggcgggaaccttgatggttgagccgacggaa
tccgaaagcaaagtcgaaatcgatcgctttattgacgcaatgctggcaattcgcgaagaa
atcagcaatgtggcaaaaggggaatggccgctggaagacaatccactggtgaatgcgcct
cacgttcaggcagagctggtttctgactgggaacatgcatacagccgtgaaatcgctgtc
ttcccaacagtagaaaccaaagccaataaatactggccaacggttaaacgtctcgacgat
gtatatggtgaccgcaatttacattgctcctgtgcaccgattgaagattatcgttaa
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