Xenorhabdus bovienii SS-2004: XBJ1_3453
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Entry
XBJ1_3453 CDS
T01186
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00010
Glycolysis / Gluconeogenesis
xbo00020
Citrate cycle (TCA cycle)
xbo00260
Glycine, serine and threonine metabolism
xbo00280
Valine, leucine and isoleucine degradation
xbo00310
Lysine degradation
xbo00380
Tryptophan metabolism
xbo00620
Pyruvate metabolism
xbo00630
Glyoxylate and dicarboxylate metabolism
xbo00640
Propanoate metabolism
xbo00670
One carbon pool by folate
xbo00785
Lipoic acid metabolism
xbo01100
Metabolic pathways
xbo01110
Biosynthesis of secondary metabolites
xbo01120
Microbial metabolism in diverse environments
xbo01200
Carbon metabolism
xbo01210
2-Oxocarboxylic acid metabolism
xbo01240
Biosynthesis of cofactors
Module
xbo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xbo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xbo_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
xbo_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
XBJ1_3453 (lpd)
00020 Citrate cycle (TCA cycle)
XBJ1_3453 (lpd)
00620 Pyruvate metabolism
XBJ1_3453 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
XBJ1_3453 (lpd)
00640 Propanoate metabolism
XBJ1_3453 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XBJ1_3453 (lpd)
00280 Valine, leucine and isoleucine degradation
XBJ1_3453 (lpd)
00310 Lysine degradation
XBJ1_3453 (lpd)
00380 Tryptophan metabolism
XBJ1_3453 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XBJ1_3453 (lpd)
00670 One carbon pool by folate
XBJ1_3453 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xbo04147
]
XBJ1_3453 (lpd)
Enzymes [BR:
xbo01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
XBJ1_3453 (lpd)
Exosome [BR:
xbo04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
XBJ1_3453 (lpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
GIDA
FAD_binding_2
AlaDh_PNT_C
HI0933_like
NAD_binding_8
Thi4
FAD_binding_3
DAO
Motif
Other DBs
NCBI-ProteinID:
CBJ82571
UniProt:
D3V4J2
LinkDB
All DBs
Position
complement(3357206..3358633)
Genome browser
AA seq
475 aa
AA seq
DB search
MSTEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLVERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAQHGIVFGEPQTDIDKIRLWKEKVISQLTGGLGGMAKGRKVNVVNGIGKFT
GANTLVVEGEKGATTINFDNAIIAAGSRPIQLPFIPHDDPRVWDSTDALELKTVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKSLDAGQAGVAVDERGFIHVDKQ
MRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETATFPWAASGRAIASDCAEGMTKLIFDKESNRIIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLYESIGMAAEMYEGSITDLPNPKAKKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaaattaaagcccaggtagtggtgcttggcgcaggccctgctgggtattct
gctgctttccgttgtgcggacttaggtttggataccgttctggtggagcgctactctact
ctgggtggtgtttgccttaacgtcggttgtatcccatccaaagcgctgcttcatgttgca
aaagtgattgaagaagcaaaagcactggcacaacacggtattgtgtttggtgagccacaa
actgatatcgataaaatccgtctctggaaagaaaaagtgatttcccagctgacaggtggt
ctgggcggtatggctaagggccgtaaagttaatgttgttaacggcattggtaaatttaca
ggcgctaacactttggtagtagaaggcgagaaaggcgcaacaacgattaattttgataat
gccattatcgctgcgggttcacgcccaattcaactgccattcattccacatgatgatcct
cgcgtatgggattctaccgatgcactggaactgaaaactgttccggaacgtctgctggtt
atgggcggcggtattatcggtctggaaatgggaacagtttaccatgcactgggctctcag
attgacgtggtagaaatgttcgatcaggttattcctgctgcggacaaagatattgttaaa
gtgttcactaaacgcatcagcaagaaattcaacctgatgctggaaaccaaagtgaccgca
gtagaagctaaagaagatggcatctatgtaacgatggaaggcaagaaagcgccagcagaa
ccacagcgttatgatgcagttctggttgctatcggccgtgtacccaatggtaagtcgctc
gacgcgggtcaagcgggtgttgcagttgatgagcgtggctttatccatgtggataagcaa
atgcgtactaacgtgcctcatatttttgccatcggtgatatcgttggtcagccaatgctg
gcacacaaaggtgttcacgaaggtcacgttgcggctgaagtgatctctggtaagaaacat
tacttcgatccaaaagtgattccatcgattgcctacactgaaccagaagtggcttgggtt
ggtctgactgagaaagaagcgaaagagaaaggcatcagctatgaaaccgccactttccca
tgggctgcgtcaggccgtgcaatcgcatctgattgtgcagagggtatgaccaaactgatt
ttcgacaaagaaagcaaccgtattatcggtggtgctattgtcggtactaacggtggtgag
ctgttgggtgaaattggtctggctattgaaatgggttgtgatgcggaagatatcgctctg
actatccacgctcacccaacgctgtatgaatcaatcggtatggctgcggaaatgtatgaa
ggcagtattactgatttgccaaatcctaaggcaaagaaaaagaaataa
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