Xenorhabdus bovienii SS-2004: XBJ1_3478
Help
Entry
XBJ1_3478 CDS
T01186
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00470
D-Amino acid metabolism
xbo00550
Peptidoglycan biosynthesis
xbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XBJ1_3478 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XBJ1_3478 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xbo01011
]
XBJ1_3478 (murD)
Enzymes [BR:
xbo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
XBJ1_3478 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
xbo01011
]
Precursor biosynthesis
Amino acid ligase
XBJ1_3478 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
CBJ82596
UniProt:
D3V4L7
LinkDB
All DBs
Position
complement(3387592..3388902)
Genome browser
AA seq
436 aa
AA seq
DB search
MAEYLGKKVVIVGLGLTGLSCVDFFMARGVTPRVMDTRLVPPGSDKLPDDVACHTGSLNT
QWLMDADLIVASPGIALATPELQAAADAGIEIVGDIELFCREATTPIVAITGSNGKSTVT
TLVGEMAKEAGWQVGVGGNIGIPALELLKQPCQLYVLELSSFQLETTYSLKAAAATVLNV
TEDHMVRYPDGLSQYRAAKLRIYDQAKVCVVNEQDALTLPEAGKDSRCISFGVDSGAYQL
ESGRQQLVVNHQSLLETRQIRLTGQHNYTNGLAALALADAVGIPREASIQALQTYPGLEH
RFQVVHMRNGVRWVNDSKATNVGSTQAALSGLTLEGTLYLLLGGDGKAADFTPLQPYVSG
NNIRLYCFGCDGNQLAQLRPEISVLTETMEQAMRKIAPKLMTGDMVLLSPACASFDQFNG
FEHRGHEFARLAEELG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatatttgggtaaaaaagtcgttattgttggattggggctgacgggcctctcc
tgcgttgactttttcatggcacgtggtgtgactccacgtgtgatggatacccgcctagtg
ccaccgggcagcgataagctgcctgatgacgttgcgtgtcacactggtagcctgaataca
caatggttgatggacgcggatttaatcgttgccagtccgggtattgcactggcaacacct
gagttacaggcagcggccgacgccggcattgaaattgtcggtgatattgaattgttttgc
cgtgaggcgacgacaccgattgttgccattacggggtcaaatggtaaaagcaccgtcacg
actcttgtcggggagatggcaaaagaagccggatggcaggttggtgtgggaggaaatatt
ggtattcctgcactggaactgctgaaacagccttgccagttgtatgtattggaactctcc
agctttcagcttgaaacgacttacagtctgaaagctgccgcagcgactgttctgaatgtc
actgaagaccatatggttcgttatcctgatgggttgtcgcagtatcgtgcagcaaaactg
cgtatctatgatcaggcaaaagtgtgcgtggtgaatgaacaggatgcattgacattgccg
gaagcaggtaaagatagccgctgtatcagttttggtgtggatagtggtgcttaccagctt
gagagtggacgtcaacaattggtggttaaccatcaatctttattggaaacccgtcagatt
cggttaacagggcaacataattacaccaacggcctggcagcattggcgttggctgatgct
gtaggtatccctcgcgaagccagtattcaggcattacagacttatccgggattggaacac
cgttttcaagtcgtgcatatgagaaatggcgttcgttgggtaaatgattccaaggcaaca
aatgtcggcagtactcaggcagcactcagtggactgacattggaaggtacgctctatctt
ttactcggcggggatggaaaagccgctgactttactccactgcaaccttatgtatcggga
aataacattcgcctttactgttttggttgtgatggaaatcagctggcgcaattgcgtcct
gaaatttccgtgttgacagaaacgatggaacaggcgatgaggaaaattgcaccgaagttg
atgactggcgacatggtgctgctgtcacccgcttgtgcgagctttgaccagttcaatggt
tttgaacatcgcggccatgaattcgcccgtttggccgaggagttaggctaa
DBGET
integrated database retrieval system
