Xenorhabdus bovienii SS-2004: XBJ1_3528
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Entry
XBJ1_3528 CDS
T01186
Symbol
radA
Name
(GenBank) putative ATP-dependent protease, with nucleoside triP hydrolase and multiheme cytochrome domains, DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbo03400
]
XBJ1_3528 (radA)
DNA repair and recombination proteins [BR:
xbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
XBJ1_3528 (radA)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
RecA
AAA_22
Rad51
GvpD_P-loop
ABC_tran
SLFN-g3_helicase
AAA_14
AAA_16
AAA
nSTAND3
AAA_24
NTPase_1
DUF7125
cobW
NACHT
Viral_helicase1
AAA_29
TIP49
Zeta_toxin
Beta-prop_BBS7
AAA_5
AAA_30
NPHP3_N
Herpes_Helicase
PAXNEB
DZR
Motif
Other DBs
NCBI-ProteinID:
CBJ82646
UniProt:
D3V4R7
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All DBs
Position
complement(3438526..3439908)
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AA seq
460 aa
AA seq
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MAKAVKRAFVCNECGADYPRWQGQCTACHAWNTITEVRLAAASSSRSERFSGYAGEVSIS
KVQKLAEISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQIMCQLSE
QMKTLYVTGEESLQQVAMRAHRLGLPTDKLNMLSETSIEQICLIAEQEQPKLMVIDSIQV
MHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIIMVGHVTKDGSLAGPKVLEHCIDCSV
MLDGEADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSVM
IVWEGTRPLLVEVQALVDHSMMPNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFVN
VVGGVKVTETSADLALLLSLVSSFRDRPLPRDLVVFGEVGLAGEIRPVPSGQERISEAAK
HGFKRAIVPHANMPKKTLPEMKVFGVKKLADALSVLDELD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagcagtaaaaagggcatttgtctgtaatgaatgtggcgcggattatccccgc
tggcaggggcaatgtaccgcatgtcacgcatggaataccattacggaagtgcgtttggcc
gccgcttcatcttcccgcagtgagcgtttcagtggctacgcgggagaagtcagtatcagc
aaagtgcagaaactcgctgaaatcagtctggaagaattgccgcgattttcgactgggttt
aaagaatttgaccgtgtgctgggtggtggcgttgtccccggcagcgcaattttgattggc
ggtaatcctggtgcggggaaaagtactctgctattacagatcatgtgtcagttatctgaa
cagatgaaaactctgtatgtgacaggggaagaatcattgcagcaggtggcaatgagggca
cataggttgggattgccgacggataaattgaatatgctgtcagaaacgagcattgagcag
atttgtctgattgccgagcaggaacagcctaaactgatggtgatcgactctattcaagtc
atgcacatggcggatattcaatcttcaccgggcagtgtcgcgcaggtcagagaaactgcg
gcttatttgacgaggttcgcgaaaacacgtggtgtggccattatcatggttgggcatgtg
acaaaagatggctccctggcggggccaaaagtgttggagcactgcatagattgctcggta
atgctggatggtgaggcggattcccgttttcgcactctgcgcagtcataaaaaccgtttt
ggtgcagtaaatgagctgggcgtgtttgccatgactgaacagggattgcgggaagtgagt
aacccttcggcgattttcttgagccgaggagatgaggttacgtcgggaagttccgtgatg
atcgtatgggaaggcacccgtcctttgctagtggaggttcaggcgctggttgatcactcc
atgatgcctaatccgcgtcgcgtcgctgtagggcttgaacaaaatcgtctggcgattcta
ctggctgttttacatcggcatggtggtttgcaaatggctgaccaagacgtctttgttaac
gtcgttggcggggtgaaagtgacagagaccagtgctgatcttgcattattgctttctttg
gtttccagtttccgtgatcgtcctttacctcgtgatcttgtggtatttggtgaagtcggt
ctggcaggggaaattcgccccgtccccagcggtcaggaacgcatttcagaagcagctaaa
catggttttaaacgcgctattgtgcctcacgccaacatgccgaaaaaaacattgccagaa
atgaaagtctttggcgtcaaaaaattggctgatgcactatctgtgctggatgagttggat
tga
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