Xenorhabdus bovienii SS-2004: XBJ1_3552
Help
Entry
XBJ1_3552 CDS
T01186
Symbol
holD
Name
(GenBank) DNA polymerase III, psi subunit
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo03030
DNA replication
xbo03430
Mismatch repair
xbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XBJ1_3552 (holD)
03430 Mismatch repair
XBJ1_3552 (holD)
03440 Homologous recombination
XBJ1_3552 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xbo03032
]
XBJ1_3552 (holD)
03400 DNA repair and recombination proteins [BR:
xbo03400
]
XBJ1_3552 (holD)
Enzymes [BR:
xbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XBJ1_3552 (holD)
DNA replication proteins [BR:
xbo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XBJ1_3552 (holD)
DNA repair and recombination proteins [BR:
xbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XBJ1_3552 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
CBJ82670
UniProt:
D3V4U1
LinkDB
All DBs
Position
complement(3462838..3463248)
Genome browser
AA seq
136 aa
AA seq
DB search
MTKRDRLLAQLGITQWVVRSPKALQGELSVLIPDSTRLLIITHDHIDLSHSLFADIFTAM
RIDVSSVYCITTKDVELLSESIHCPCWLLGVDITLSTQGISLRSPALNDLSLDGNAKRSF
WQQIYHYEEYFSINSH
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcgtgacagattactcgcccaattggggatcacccagtgggttgtgcgcagc
ccgaaggccttgcagggtgaattgtctgtcctcatccctgactcaactcgtctgttgatc
attacccatgatcatattgatttaagtcattcattgtttgctgatatttttacagccatg
aggattgatgtctcatcggtttattgcatcacgacaaaagatgttgagctgctttcggaa
tcaatccattgtccatgctggctgttgggggttgatattaccttatcaacacaagggatt
tctttgagaagcccagcattaaatgacttatcccttgacgggaatgcaaaacgctctttt
tggcaacaaatttaccattatgaagaatatttctctattaattcccactga
DBGET
integrated database retrieval system
