Xenorhabdus bovienii SS-2004: XBJ1_3827
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Entry
XBJ1_3827 CDS
T01186
Symbol
kdsC
Name
(GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, KDO biosynthesis (E. coli B strain)
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00541
Biosynthesis of various nucleotide sugars
xbo01100
Metabolic pathways
xbo01250
Biosynthesis of nucleotide sugars
Module
xbo_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
XBJ1_3827 (kdsC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xbo01005
]
XBJ1_3827 (kdsC)
Enzymes [BR:
xbo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
XBJ1_3827 (kdsC)
Lipopolysaccharide biosynthesis proteins [BR:
xbo01005
]
Lipid A
XBJ1_3827 (kdsC)
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GFIT
Motif
Pfam:
Hydrolase_3
Hydrolase
HAD_2
S6PP
Motif
Other DBs
NCBI-ProteinID:
CBJ82945
UniProt:
D3V5L6
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All DBs
Position
complement(3705947..3706510)
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AA seq
187 aa
AA seq
DB search
MSQKTYLDTCYGPVNEEIIERASKIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYG
IRCLITSGIEVAIITGRKAKLLEDRAETLGITHLYQGQSDKVLAYQELLDKLTLQPEQVA
YIGDDLIDWPVMAQVGLSVAVSDAHPLLLPRADYVTQIAGGRGAVRELCDLVLFAQNKLE
GAKGLSI
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaaaacgtatctggacacctgttatggcccggtcaacgaagaaattatcgaa
agagccagtaaaatccgtctactgatttgtgatgttgatggtgtgatgtcagatggcctg
atatatatgggcaaccagggtgaagaactgaaagcctttaacgttcgtgatggttacggc
atccgttgtctgattacctcaggcattgaagtcgccatcattactggccgtaaagctaag
ttgctggaagatcgcgcagaaacactgggtattacacatctttaccaaggacagagcgat
aaggttttggcgtatcaggaactgttagataaactaacgttacagccagaacaggtcgct
tatattggtgatgatcttatcgactggcctgtaatggcacaagttgggttatctgttgcg
gtttctgatgcccatccactgctgctgccaagagcagattatgtgactcagattgcaggt
ggccgtggtgcagtcagggagctttgtgatttggtacttttcgctcagaataagctggaa
ggtgccaaagggttatcaatataa
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