Xenorhabdus bovienii SS-2004: XBJ1_4028
Help
Entry
XBJ1_4028 CDS
T01186
Symbol
thiC
Name
(GenBank) 5'-phosphoryl-5-aminoimidazole = 4-amino-5-hydroxymethyl-2-methylpyrimidine-P
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00730
Thiamine metabolism
xbo01100
Metabolic pathways
xbo01240
Biosynthesis of cofactors
Module
xbo_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
XBJ1_4028 (thiC)
Enzymes [BR:
xbo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
XBJ1_4028 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CBJ83140
UniProt:
D3V661
LinkDB
All DBs
Position
3874881..3876854
Genome browser
AA seq
657 aa
AA seq
DB search
MSNNIVIPTTDVIPAADIAPKTYPARPRKAQRDAAQEFINSVQGVTFPNSRRIYLAGSRK
DIQVPMREIQLSPTLIGGTNENPQFEENEPVPIYDTSGSYGDPDSVLDVRAGLKKIRQLW
IEERNDTEPVAVLSSDFTQQRLADAGLDHLRFNQLPHPLKARQSKRVTQLHYARQGIVTP
EMEFIALRENMGRERIRSEVLLQQHPGQSFGANLPDNITPEFVRQEVAAGRAIIPANINH
PESEPMIIGRNFLVKVNANIGNSSVTSSIEEEVEKLIWSTRWGADTVMDLSTGRYIHETR
EWILRNSPVPIGTVPIYQALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRY
VPMTAKRLTGIVSRGGSIMAKWCLSHHQESFLYTHFREICEICAAYDVSLSLGDGLRPGS
IQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHIPMQLIRRNMTEELEHCHEAPFY
TLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKDDVKQGLITYKIS
AHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPETARAYHDETLPQQSGKVAHF
CSMCGPKFCSMKITQDVRDYAAKLEQEAGMEQMSEEFLAHGSELYHSAEDISDEKSA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatattgttatcccaactactgatgtcatccctgcggccgatatcgccccc
aaaacctatcctgcacggccacgcaaggcacaacgggatgcagcacaggaatttatcaat
tccgttcaaggcgttaccttccccaactcacgcagaatttaccttgccggctcccgcaaa
gatattcaagttccgatgcgtgaaatccagttatcaccaacactgattggcggcaccaat
gaaaatcctcaatttgaggaaaacgaacccgtgcccatctatgatacctctggctcttat
ggagatcccgactcggtgctggatgtgcgagctggcttgaagaaaatccgtcagctttgg
atcgaagagcgtaatgataccgagccagtcgctgttctcagttctgactttacccagcag
cggcttgcggatgccggactggatcatctgcgcttcaaccagcttcctcatccattgaaa
gccagacaaagcaagcgtgtcacccaattgcactatgcacgccaaggcattgtcacaccc
gaaatggaatttatcgccctgcgagaaaatatggggcgtgaacgcatccgcagtgaagtc
ctgctccagcagcatccggggcaaagtttcggtgcaaacttgccggacaacatcacgcca
gagtttgtccgtcaggaagttgccgctggccgggcgattattcccgccaacatcaaccat
cccgaatccgagccgatgattattggccgcaattttctggtcaaagtgaatgccaacatc
ggtaactcctccgtcacatcctccattgaagaagaagtggaaaaactgatttggtctacc
cgctggggagcagatacggtgatggatctctctactggccgttatatccacgaaacccgc
gaatggatcttacgtaacagtcctgtacctatcggtacagtgccaatttatcaggcgctg
gaaaaagtgaacggcgtggcagaaaacctgacatgggaaatgttccgcgatactttactg
gaacaagccgagcaaggggtggattatttcaccatccacgcaggcgtcctgctacgttac
gtgccgatgacggccaaacgtctgaccggcatcgtctctcgtggaggttccattatggca
aaatggtgtctctcccatcatcaggaaagcttcctctatacccattttcgcgaaatttgt
gaaatctgcgccgcctatgacgtttctctgtctttgggagatggactgcgtcccggatca
attcaggatgccaatgatgaggcgcaatttgccgaactgcatactctcggcgagttgact
aaaattgcctgggagtacgatgttcaggtgatgatcgaaggaccggggcatatcccgatg
caattaatccgccgcaatatgacggaagaattggaacattgccacgaagcgccattctat
acgctggggccactgacaaccgatatcgctcccggttatgaccatttcacctccggcatc
ggtgcggccatgataggctggtttggttgtgcaatgctgtgctacgtcacaccaaaagaa
caccttggtctccccaacaaagacgacgtaaaacaagggctgattacgtataaaatctcg
gcacatgcggcagatctcgccaaaggccatcccggagcacaaatccgcgataacgccatg
tcaaaagcacgttttgaattccgctgggaagaccaattcaatctggctcttgatcctgaa
accgcccgcgcctatcacgatgaaaccctgccacagcaatccggcaaagttgctcacttc
tgctctatgtgtgggccaaaattctgctccatgaaaatcacgcaggacgtgcgcgattat
gcagcaaaactggaacaggaagctggcatggaacagatgtcagaagaattcctcgctcat
ggcagcgagctgtatcacagtgctgaggacataagcgatgaaaaatcagcctga
DBGET
integrated database retrieval system
