Xenorhabdus bovienii SS-2004: XBJ1_4054 Help Entry XBJ1_4054         CDS       T01186                                  Symbol rpoB Name (GenBank) RNA polymerase, beta subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism xbo  Xenorhabdus bovienii SS-2004 Pathway xbo03020   RNA polymerase Brite KEGG Orthology (KO) [BR:xbo00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     XBJ1_4054 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:xbo03021]     XBJ1_4054 (rpoB)    03400 DNA repair and recombination proteins [BR:xbo03400]     XBJ1_4054 (rpoB) Enzymes [BR:xbo01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      XBJ1_4054 (rpoB) Transcription machinery [BR:xbo03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      XBJ1_4054 (rpoB) DNA repair and recombination proteins [BR:xbo03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       XBJ1_4054 (rpoB) SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 Motif Other DBs NCBI-ProteinID:  CBJ83166 LinkDB All DBs Position complement(3906853..3910881) Genome browser AA seq 1342 aa AA seqDB search MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQNGLEAAFRSVFPIQ SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR GSWLDFEFDPKDNLFVRIDRRRKLPASIILRAMNYSTEDILNLFFNKTIFEIRDNKLQMT LVPERLRGETASFDIEANGKLYVEKGRRITARHIRQLEKDQVDRIEVPVEYIAGKVVAKD YIDQNTGEILCAANMELSLDLLARLSQSGHKTIETLFTNDLDHGAYISETLRVDPTNDRL SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLDRTEIEGSGIL SKEDITDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNEYGFLETPYRLVRDGVVT DEIHYLSAIEEGNYVIAQANTVLDEEGHFVEDLVTCRHYDESSLFNRDQVQYMDVSTQQI VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTSVAKR GGVIQYVDASRIVIKVNEDEMYAGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGELVERG DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK LLRAIFGEKASDVKDSSLRVPNGVAGTIIDVQVFTRDGVEKDKRALEIEEMQLRQAKKDL TEELRIFEAGLFARIHSVLVAGGVEAEKLSKLPRERWLELGLADEEKQNQLEQLAEQYDE LKTEFEKKLDAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK LREFIQKAYDLGDDTRQKVDLNTFTDEEVLRLAENLKKGMPIATPVFDGAKETEIKELLQ LAGLPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP ESFNVLLKEIRSLGINIELEDE NT seq 4029 nt NT seq  +upstreamnt  +downstreamnt atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa gttttggatattccatatctcctttctatccaacttgactcgttccagaagtttatcgag caagatcctgaaggccaaaatggactggaagcggccttccgttctgtgttcccaattcag agttacagcggcaattccgagctgcaatatgtaagctaccgtcttggtgagcctgttttt gatgtgcaagagtgtcagatccgtggtgtgacttattccgcaccgctgcgcgttaaactg cgtctggtgatctatgagcgcgaagcgccagaaggcacagtcaaagacattaaagaacaa gaagtctacatgggtgaaattccactcatgactgataacgggactttcgttatcaacggt actgagcgtgttatcgtatctcagttgcatcgtagcccaggcgttttttttgacagcgat aagggtaaaacccattcatccggtaaggtactgtataacgcgcgtatcatcccttaccgt ggttcatggctggatttcgaattcgatcctaaagataatctgtttgtgcgtatcgaccgc cgtcgtaaactgccggcttcgattattctgcgtgcaatgaattatagtactgaagacatt ctgaacctgttcttcaacaaaacgatcttcgaaattcgcgataacaaattgcagatgact ctggttccagaacgtctgcgtggtgaaacggcttcatttgatattgaagcaaacggcaaa ctttatgttgaaaaaggccgtcgtatcaccgcacgtcatatccgtcagttagaaaaagat caggtagaccgtattgaggttcctgtcgaatatatcgcgggtaaagtcgtcgcaaaagat tacatcgatcaaaatacgggtgaaatcctctgcgctgctaacatggagctctctctggat ctgctggcgcgtctgagccagtctggtcacaaaaccatcgagactctgtttaccaacgat ctggatcacggtgcatacatctccgaaactctgcgtgttgacccaaccaatgatcgtctg agcgcgctggttgaaatttaccgcatgatgcgtccgggtgagccaccaacacgcgaagcc gcagaaaatctgtttgagaacctgttcttctctgaagaccgctatgatctgtctgcggtt ggccgcatgaagttcaaccgttctctggatcgtacagaaattgaaggttccggtatcctg agcaaagaagacatcaccgatgtgatgaagaagctcatcgatattcgtaacggtaaaggc gaagtggacgatatcgaccacttgggtaaccgtcgtatccgttctgttggcgaaatggca gaaaaccagttccgcgttggcttagttcgtgtagaacgtgctgtgaaagagcgtctgtca ctgggcgatctggataccctgatgccacaggacatgatcaacgctaaaccaatttctgct gcggtaaaagagttctttggttccagtcagttgtcccagtttatggatcagaacaacccg ttgtctgaaattactcataaacgtcgtatctctgcattgggcccaggcggtctgacccgt gagcgtgcaggcttcgaagtacgtgacgtacacccaacccactacggtcgtgtatgtcct atcgaaacgcctgaaggtccaaacatcggtctgattaactcactatccgtttatgctcgt accaatgagtatggtttccttgaaaccccttaccgtttggtgcgtgacggcgtagtaacc gatgaaattcattatctgtctgctatagaagaaggtaactacgtcattgcacaggctaac accgtgctggatgaagaaggccacttcgtagaagatctggtgacttgccgtcattatgat gaatccagcttgttcaaccgtgatcaggttcagtatatggacgtttcgacacagcagatc gtgtccgtcggtgcttctttgatcccattccttgaacacgatgacgccaaccgtgcattg atgggtgcgaacatgcaacgtcaggcagttccgactctgcgtgctgacaagccgctggtt ggtacaggcatggagcgtgcagttgctgttgactccggtgtaacgtcagtcgccaagcgt ggtggtgtgattcagtacgtggatgcatcccgtatcgttattaaagttaacgaagacgaa atgtacgcgggtgaagctggcatcgatatctataacctgaccaaatacacgcgttccaac cagaacacctgtatcaaccagatgccatgtgtttctctgggtgaattggtagagcgtggc gatgtactggctgacggcccatccactgatttgggtgaactggcgctgggtcagaacatg cgcgtggcgttcatgccatggaatggttataacttcgaggactccattctcgtatctgag cgtgttgttcaggaagaccgtttcacaaccattcacattcaggaactggcttgtgtgtct cgtgacaccaaactggggcctgaagagatcactgctgacattcctaacgtgggcgaagct gcactgtctaaactggacgaatccggcatcgtttacattggcgcggaagtgaaaggcggc gatattctggttggtaaagtgacaccgaaaggtgaaacccaattaacgccagaagaaaaa ctgttgcgtgcgatcttcggtgagaaagcatctgacgttaaagactcttcactgcgtgtg ccaaacggtgttgccggtactattatcgacgtgcaggtctttacccgtgacggtgtagaa aaagacaagcgtgcgttggaaatcgaagaaatgcagttgcgtcaggcgaaaaaagacctg acagaagaactgcgtatcttcgaagcgggtctgtttgcgcgtattcactccgtactggtt gccggtggagttgaagcagaaaaattaagtaaactgccgcgcgagcgctggttagagctg ggtctggctgatgaagaaaaacagaatcagttggaacagctggcagaacagtatgacgaa ctgaaaactgagttcgagaaaaaactggatgctaaacgccgtaagatcactcagggcgat gatctggcaccgggtgtgctgaaaatcgttaaagtatatctggctgttaaacgccagatc cagcctggtgataagatggctggtcgtcatggtaacaagggtgttatctctaagatcaac ccgatcgaagatatgccttacgatgaaaacggaacacctgtagacatcgtattaaacccg ctgggtgtaccatcacgtatgaacatcggtcagattctggaaactcacttgggtatggcg gccaaaggcattggtgacaagatcaatgccatgctaaaacaacagcaggaagttgccaaa ctgcgtgaattcatccagaaagcctatgaccttggtgacgatacccgtcagaaagttgac ctgaatactttcactgatgaagaagttttgcgtctggctgaaaacctgaaaaaaggtatg ccaatcgcaacaccggtcttcgacggtgcgaaagagactgaaatcaaagagctgttgcaa ctggctggcttgccgacttccggtcagatcacgctgtttgacggccgcactggtgagcag tttgagcgtcaggttactgtcggttacatgtacatgctgaaactgaaccacttggttgat gacaagatgcatgcccgttctaccggttcttacagcttggttactcagcagccgctgggt ggtaaagcacagttcggtggtcagcgcttcggtgagatggaagtgtgggcattggaagca tacggtgctgcgtacaccctgcaagaaatgctcaccgtcaagtccgatgatgttaacggt cgtaccaagatgtataaaaacatcgtggatggtaaccaccagatggagccaggcatgccg gaatctttcaacgtattgctgaaagagatccgttcgttgggtatcaacatcgagctggaa gacgaataa

DBGET integrated database retrieval system