Xenorhabdus bovienii SS-2004: XBJ1_4262
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Entry
XBJ1_4262 CDS
T01186
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xbo03016
]
XBJ1_4262 (trmA)
Enzymes [BR:
xbo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
XBJ1_4262 (trmA)
Transfer RNA biogenesis [BR:
xbo03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
XBJ1_4262 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_11
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_12
PrmA
Motif
Other DBs
NCBI-ProteinID:
CBJ83365
UniProt:
D3V6T6
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All DBs
Position
4083831..4084931
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AA seq
366 aa
AA seq
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MQNVLPTEDYENQLMEKVHRLKGMMMPFSAPEPEVFRSPASHYRMRAEFRIWHEQDDLYH
IMFDQQTKQRIRIDQFPVANELINQMMQSIIAGVKDNSLLRHKLFQVDYLSTLSNKIIVS
LLYHKKLNDEWREHAITLRDQLKANGFDVQLIGRASKTKIILDHDYIDEELPIAGKTMIY
RQVENSFTQPNASINTHMLEWAVGITKGAKGDLLELYCGNGNFSLALAQNFDRVLATEIA
KPSVAAAQFNIEANQIDNVQIIRMSAEEFTQAMNGEREFNRLHGIDLKSYQCETIFVDPP
RSGLDDATVKMVQGYSQILYISCNPETLSQNLETLTQTHKISRLALFDQFPYTHHMECGV
LLEKRI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgtcttgccaacggaagattatgaaaatcaattgatggaaaaggtccatcgt
ctgaaaggaatgatgatgccatttagtgcacctgagcctgaggttttccgttcccctgca
tcacattacagaatgcgcgctgaattccgcatctggcatgagcaagatgatctttaccac
attatgtttgaccagcagaccaaacaacgtattcgtattgatcaatttccggttgccaat
gagctgattaaccagatgatgcagtcaatcattgcgggcgtgaaagataattcactcttg
cgtcataaactgtttcaagtggattatctgtcaaccctcagtaataagattattgtctct
ctgctttatcataaaaagttgaatgatgaatggcgcgagcatgccatcacactacgtgat
caattaaaagcaaatggatttgatgttcagctgatcgggcgagcgtcaaaaaccaagatc
atactcgaccatgactatattgatgaagaactgccgattgcgggtaaaacgatgatttac
cgtcaagttgaaaacagtttcacgcaaccgaatgccagcatcaatactcatatgttggaa
tgggcagtgggtattacaaaaggcgccaagggagatctactagagctatattgtggtaat
ggcaatttttctctagcattagcacagaactttgatcgcgtactggcgacagaaattgcc
aaaccttcggttgctgccgcgcaatttaatattgaagcgaaccaaattgataatgtgcaa
attatccgtatgtcagcagaagagtttactcaagcaatgaatggagagcgggaatttaac
cgactgcatggcattgatctaaaaagctatcaatgtgaaaccatttttgttgatcctcca
cgcagtggattagatgatgcaacagttaaaatggtacagggatactcacagattctttat
atttcctgtaatccagaaacactcagccagaatctggaaacactgacacaaacccataaa
ataagccgactggcactctttgatcaattcccttatacgcaccatatggagtgtggtgta
ttactggaaaaacgtatttaa
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