Xenorhabdus bovienii SS-2004: XBJ1_4280
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Entry
XBJ1_4280 CDS
T01186
Symbol
priA
Name
(GenBank) primosomal protein N' (factor Y) directs replication fork assembly at D-loops, ATP-dependent
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XBJ1_4280 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbo03400
]
XBJ1_4280 (priA)
Enzymes [BR:
xbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XBJ1_4280 (priA)
DNA repair and recombination proteins [BR:
xbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XBJ1_4280 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
Zn_ribbon_6
TrwB_AAD_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBJ83383
UniProt:
D3V6V4
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All DBs
Position
4104409..4106607
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AA seq
732 aa
AA seq
DB search
MTVVQVALPVPLTRSFDYLLPEGLPLPMTGVRVLVPFGKRNAIGIVTGTAGNSQIPLEQL
KPLAAILDAQPLFPDDLWQLLQWSACYYHYPLGEVLFHAMPVLLRQGKPAEFTPLWQWQV
TEAGHEFPLEQLKRSVKQQQALASLRLKPIYRHQISELEFSESALQSLKKKALIDLHPIQ
PEAENWHEQFQIIGERLQLNTEQATAVGTVRAEDQIFSPWLLAGITGSGKTEVYLSVLEN
ILAQGKQALILVPEIGLTPQTIRRFRERFNAPVDVLHSALNDSERLSVWLRAKRGDNAIV
IGTRSALFTPFAHLGVIIIDEEHDSSYKQQEGWRYHARDLAVFRAKKENIPIMMGTATPA
LETLFNVQQGKYRQLTLTQRAGEAKPAVQHLLDLKGLPLTVGLSQPLINRIGEHLKADNQ
VILFLNRRGYSPALLCHECGWIAECQRCDHYYTLHQSHRHLRCHHCDSQRPIPRQCPQCG
TTHLIPVGLGTEQLEDGITKLFPDIPVTRIDRDTTSRKGALEQQLAAVHQGGARILIGTQ
MLAKGHHFPDVTLVVLLDVDGALFSADFRAAERFAQLYTQVSGRAGRAGKRGEVVLQTHH
PEHPLLQVLLEKGYDAFARQAMEERQQVFLPPFASHILLRSEDHDNQQAPAFLQQMRQLF
EHHALRDEHLWIMGPVPALQAKRGGHFRWQLLIQHPSRIFLQKMMAAIYPQITALPQARK
VKWNIDVDPTEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgttcaggttgcgctgcctgtacccttaacccgctcttttgattatctatta
cccgaaggattaccgttgcccatgacaggtgtgcgggtgcttgtgccgtttggcaagcgc
aatgcaataggcattgtcactggaaccgcaggcaacagccaaattccccttgaacagctc
aagccacttgccgcgatccttgatgcacaaccgcttttccctgacgacctttggcaattg
ctccagtggtcagcctgctattatcactatccactgggagaagtattattccatgccatg
cccgtcttactgcgacagggaaaacccgccgaatttactccactttggcaatggcaggtt
acagaagcaggccatgaattccctctggagcagcttaagcgttccgttaaacagcaacaa
gcgctggcttcgctacgcctgaaacccatttaccgtcatcaaatttctgaactggaattc
agcgaaagcgcactgcaatcattgaaaaagaaagcgctgattgatctgcatccgatacag
ccggaggcagaaaactggcatgagcagtttcagattattggtgaacgactacaactcaat
acagagcaggccaccgcagtcggcactgtccgagcagaagatcagattttttctccatgg
ttgcttgcgggtattacgggttcaggcaaaactgaagtgtatcttagtgtgctggaaaat
attctcgcacagggaaaacaagcgctgattttagtcccggaaattggtctgactccgcaa
actatccgccgattcagagaacgtttcaatgcacctgtcgatgtcctgcactccgcctta
aatgacagtgaacgcctgtcggtatggctacgagccaaacggggagataacgcgattgtc
attggtacgcgttccgcattgttcaccccctttgcccatctgggcgtcatcattatcgat
gaagaacatgacagctcctataaacagcaagagggctggcgctatcacgcccgtgatttg
gccgtgttccgagccaagaaagaaaacattcccatcatgatgggtacagcaacgccggct
ctagaaacgctgttcaatgtgcagcaggggaaatatcgacaattgacactgacccaacga
gcaggtgaagccaagcctgcagttcagcatttgctggatttgaaaggcttgccattgaca
gtcggtttatcccagccgctcatcaatcgcattggtgagcatctgaaagcggataatcaa
gtcatcctgtttctgaaccgccgtggttattcccccgctttgctttgccatgaatgtggc
tggatagcggaatgccaacgctgcgatcactactacactctgcaccagagccatcgccat
ctgcgttgccatcactgtgacagccagcgtccgatcccgcgccaatgcccccagtgtggc
actactcatttaattcccgtcggattaggaaccgagcagcttgaagatggcatcacaaaa
ttgtttcctgatattcccgttacccgtatcgatcgggacaccaccagccgcaagggagca
ttggaacaacaactggcggcagtgcaccaaggtggtgcccgtattttaattggtactcag
atgttggcgaaaggccaccatttcccagatgtcactttagtcgtcttgcttgatgttgat
ggcgctctgttttctgccgatttccgggcggctgaacgtttcgctcaactgtatacccaa
gtctccggccgcgcgggacgggcgggtaaacgaggggaagttgtccttcagacccaccat
cccgaacatccactcttgcaggtgttgctggaaaaaggttatgacgcatttgcccgtcaa
gcgatggaagaacgtcaacaagtgtttctgccgccgtttgccagccacattctgctccgt
tcagaagaccacgacaatcagcaagcccctgcttttttgcagcaaatgcgtcaattattt
gaacatcacgctctgcgtgatgagcatttatggatcatggggccagttcccgcattacag
gccaaacgtggtggccactttcgctggcaattactgattcaacacccttcacgtattttt
ctacagaaaatgatggcggcaatttatccgcaaatcaccgcgctcccacaggcacgcaag
gtgaaatggaacattgatgttgatcccacagaaggctga
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