Xenorhabdus bovienii SS-2004: XBJ1_4346
Help
Entry
XBJ1_4346 CDS
T01186
Symbol
rfaQ
Name
(GenBank) lipopolysaccharide core biosynthesis; modification of heptose region of core
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00540
Lipopolysaccharide biosynthesis
xbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
XBJ1_4346 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xbo01005
]
XBJ1_4346 (rfaQ)
Enzymes [BR:
xbo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
XBJ1_4346 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
xbo01005
]
Core region
XBJ1_4346 (rfaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
CBJ83449
UniProt:
D3V720
LinkDB
All DBs
Position
4164123..4165190
Genome browser
AA seq
355 aa
AA seq
DB search
MIKNHNGIKKILVIRLQHHGDMLLITPVISTLKYHYPDAKIDVLLYQETLPMLENSPEIS
SIFSIDRKWKNFGAKKHLLLEWDLLKTLSQQRYDLTINLADQWRSAFITRFIGAPIRLAL
DYPKRQNWKWRLCHTEVVSTIGHDSLHTVEQNLSILKPLQLTPLINKVTMSYGKDDLQWV
KDTLSGYKFAENYLVIQPTSRWFFKCWDEIKMAKVITALQKEQQNIIITSGPDRRELEMV
DTILSYCPDKNNILSLAGQLTLPKLAALIDHSKLFIGVDSVPMHMAAALKTPCIALFGSS
KLTFWKPWQSIGEVIWAGDYGNIPHPDDIKTHTDTRYLDLIPTDAVISAARKYIS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaatcataatggaatcaaaaaaattctggtgataagactacaacatcatggc
gatatgctactaatcacacctgtaatcagtacattaaagtaccactatccagatgcaaaa
atcgatgtgctcctttaccaagaaaccttgcctatgctggaaaactcacctgaaatttcg
agtattttttcaatagatcgcaaatggaaaaattttggagcaaaaaaacatttattactt
gaatgggacttactcaaaacattaagccaacaacgctatgatttaactatcaatcttgcc
gatcaatggcgaagtgcctttattacccgctttatcggagctcctattcgcctcgctctg
gattaccccaaacgtcaaaattggaagtggcgtctttgccatactgaagtagtatccaca
attggtcacgattctttgcatacagtagaacaaaacctttcgattctaaaaccattacaa
cttactcctctcatcaataaagtaacgatgagttatggtaaggatgatttgcagtgggta
aaagatacgctttccgggtacaaattcgccgaaaattacctcgtcatacaacctacttcc
aggtggttctttaaatgctgggatgaaattaaaatggcaaaagtgatcacagcgctacag
aaggaacagcaaaatatcatcattacttctggacctgataggcgggaattagagatggtt
gatactatcttgtcatactgccctgataagaacaatatactctctctagcaggacaatta
acgttacctaaactagcagcattgattgatcactcaaaattatttatcggtgttgactca
gttcccatgcacatggccgcagccctgaaaacaccctgtattgcattatttgggtcatcc
aaactgacgttctggaaaccttggcaatctatcggtgaagtgatttgggctggagattat
ggcaacatcccacatccagatgatattaagacccatacagatacgcgttatttggatttg
ataccaacagatgcggtcatttcagcagcaaggaaatatatttcatga
DBGET
integrated database retrieval system
