Xenorhabdus bovienii SS-2004: XBJ1_4352
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Entry
XBJ1_4352 CDS
T01186
Symbol
mutM
Name
(GenBank) formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil and 5-hydroxymethyluracil
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XBJ1_4352 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbo03400
]
XBJ1_4352 (mutM)
Enzymes [BR:
xbo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
XBJ1_4352 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
XBJ1_4352 (mutM)
DNA repair and recombination proteins [BR:
xbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XBJ1_4352 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Zn_ribbon_IS1595
NFACT_N
Zn_ribbon_TiaS
DUF7577
Motif
Other DBs
NCBI-ProteinID:
CBJ83455
UniProt:
D3V726
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All DBs
Position
complement(4170097..4170906)
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPHLTGNVIQYSEVRNSRLRWPVSEQIMKLADQPVLSVRRRAKYLL
LELPEGWIIIHLGMSGSLRILLNESPPEKHDHVDLIMADGKILRYTDPRRFGAWLWSDNL
DECSVLAHLGPEPLSDAFDGEYLYTLSRHKKTVIKPWLMDNKVVVGVGNIYANEALYVAH
ILPERPVNSLTQEEAYLLADTIKQILHRSIEQGGTTLKDFLQSDGKPGYFAQELFVYGKK
GELCPTCGEKIESIKLGQRSTFFCRQCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctaccagaggttgaaaccagtcgccggggaattgagccccatttgacgggt
aatgtgatccaatattccgaggtcagaaattcgcgcttgcgctggccagtttccgaacaa
atcatgaagcttgctgaccaaccggtactcagtgtccggcgtcgggcaaagtacttattg
cttgaactgcctgagggctggattattattcaccttggtatgtctggtagtttacgtatc
ttgctgaatgaatctcctcctgaaaaacatgatcacgttgatttgattatggcagatggc
aaaatcctccggtataccgatccccgacgttttggggcgtggctatggagtgacaatctt
gatgagtgttctgtattggctcatttaggccctgagcctctttctgatgcgtttgatggt
gaatatctttataccctttcccgccacaaaaaaacggtgatcaaaccttggttgatggat
aacaaggtggttgttggagttgggaatatctatgccaatgaagctctgtatgttgcgcat
attctgcctgagcgccctgtgaattcattgacacaggaagaagcttatttactggccgat
acgataaaacagatcttacatcgctctattgagcagggaggcactacactgaaagatttt
ctacaatccgatggtaagccgggatattttgcgcaggaattatttgtttatggcaaaaaa
ggtgaactttgtccgacatgtggtgaaaaaattgagagtataaaactggggcaacgcagc
acgtttttctgtcgtcagtgtcagcattaa
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