Xenorhabdus budapestensis: HGO23_00015
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Entry
HGO23_00015 CDS
T07176
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HGO23_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbu03400
]
HGO23_00015 (recF)
DNA repair and recombination proteins [BR:
xbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HGO23_00015 (recF)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_27
AAA_16
ABC_tran
AAA_29
AAA
AAA_25
AAA_13
Motif
Other DBs
NCBI-ProteinID:
QTL39883
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All DBs
Position
2601..3692
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AA seq
363 aa
AA seq
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MILSRLLIRDFRNIANADLPLATGFNFLVGPNGSGKTSVLESIYTLGHGRAFRSIQAGRV
IRHDCEEFILHGRLEQQSHERTLSIGLSKNRQGDSKVRIDGSDGHKIAELAKMLPMQLIT
PEGFTLLNGGPKYRRAFIDWGCFHNEPRFFTGWVNLKRLLKQRNAALRQVTRYNQIQHWD
HELAPLATQISQWRAEYIAGIAEDIEKTCKQFLPEFTLNISFQQGWDKESEYAELLARQF
ERDKALTYTASGPHKADLRIRADGVSVEDMLSRGQLKLLMCALRLAQGEYFTRQSGQKCL
YLLDDFASELDAGRRNLLAERLKSTQAQVFVSAITPEQVADMIDVNSRMFRVEHGKIEVQ
PQD
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgattctctcgcgtctgttgatccgcgattttcgtaatatcgcaaatgccgatttgccg
ttggcaacgggatttaattttcttgttgggccaaatggcagcggcaaaacgagtgtattg
gaatccatttacacattgggccacggacgcgcttttcgcagtattcaggcaggaagagtg
atccgtcatgattgtgaggaatttattcttcatgggaggctggagcaacagtcccatgaa
cgaacgctgtctattggattaagcaaaaaccgtcagggtgacagcaaagtcagaatcgat
ggcagtgatgggcacaaaattgccgagctggcaaaaatgctgccgatgcaacttatcaca
ccagaaggttttacgctgctgaatggcggcccgaaataccgtcgtgcttttattgactgg
ggttgttttcataatgaaccgcgtttttttactggctgggtcaacctgaaaaggctgctc
aaacaacgaaatgcggcattacgacaggtaacccgttataaccagatccagcactgggat
cacgaacttgcaccgcttgcgacccagataagccaatggcgggctgaatatattgcaggt
attgccgaagatattgaaaaaacctgcaaacagtttttacctgaattcactctcaatatc
tctttccaacaaggctgggataaagagagtgaatatgcagaactactcgcgcggcagttt
gagcgcgacaaagcattaacctataccgcatccggcccccacaaagccgatctgcggatc
agggcagacggcgtatctgtagaagatatgctctcacgtggtcagcttaaactactgatg
tgtgcccttaggttagcgcagggtgaatatttcacccgacagagcgggcaaaaatgcctg
tatctgcttgatgattttgcttctgagttggatgccggtcgtcgtaatttattagccgag
cgtctgaaatctacgcaagcccaggtgtttgtcagtgcaataactcctgagcaagttgca
gacatgattgatgtaaatagcaggatgtttcgcgtagaacatggcaaaatagaggttcaa
ccacaggattaa
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