Xenorhabdus budapestensis: HGO23_01295
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Entry
HGO23_01295 CDS
T07176
Symbol
lsrA
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu02010
ABC transporters
xbu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HGO23_01295 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HGO23_01295 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xbu02000
]
HGO23_01295 (lsrA)
Transporters [BR:
xbu02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
HGO23_01295 (lsrA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
RsgA_GTPase
AAA_29
AAA_23
MukB
AAA_13
Motif
Other DBs
NCBI-ProteinID:
QTL41579
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Position
319122..320711
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AA seq
529 aa
AA seq
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MSQSNSANDSLQIHSSQKHAANTPPLLVVRGIGKQFSGLVVLKQVDFTLMSGQVHALLGG
NGAGKSTLVKIIAGLEQPDAGTLMLEGNTINHLTPAKAHQLGIYLVPQEPLLFPNLSVQE
NILFYLPKHQASKSRMQQLLVQLNCRLDLNASAGSLDVADQQMVEIMRGLMRNSRILILD
EPTASLTPAETERLFERVRELQQQQVGIIFISHKLPEIRQFADCVSVMRDGGIALSGPTV
DFSTETIIRAITPEAKASALSALTETQKLWLDADNHLSDSNLQAPVLEVVSLCGEGFRNI
SLTLKAGEIVGLAGVVGAGRTELAETLYGLRPIVSGEIRLHQQVLNPLDTAARLRCGLIY
LPEDRQASGLFLDAPLSWNVCSLIHNQSTFWTRPAYDAAVLERYRRALNIRYSHANQPAR
TLSGGNQQKILIAKCLEAKPAVLIIDEPTRGVDVGARHEIYQLIRNIASQQVAVLLISSD
LDEVVQLADRVLVMHHGEICGHLDKSSMSVDAIMHLSFGEQENGERASC
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaagcaattccgccaatgattcattgcaaatacattcatcgcaaaaacatgct
gccaatacaccaccgcttctggttgtccgggggatcggtaaacagttttccggtttggtg
gtgttgaaacaggttgattttactctgatgtcaggacaggttcatgctttgttaggagga
aatggggctggtaaatcgacgctggtgaaaatcattgcgggtcttgaacagccggatgcc
ggaacactgatgttggaaggaaataccattaaccatctgacaccagccaaagcccatcag
ttaggtatttatctagtaccgcaggaacctttgttatttcccaatctttctgttcaggaa
aacattctgttctatctgcctaagcatcaagccagtaaaagccgtatgcaacaattgttg
gtgcaactgaattgtcggttggatctgaatgcgtcagccggaagtctggatgtagcagat
caacagatggtggaaatcatgcgtggtctgatgcgcaattcccgtattttgatccttgat
gaaccgacagcttctctgactcctgcggaaacagagcgattgtttgaacgggtacgggag
ttgcaacagcaacaagtggggatcatttttatttcccacaaattacctgaaattcgccag
tttgctgactgtgtcagtgttatgcgggatggagggattgcactcagtgggccgactgtg
gatttttcgactgaaacaatcattcgggcaattacgccggaggcaaaagcttctgcatta
tctgcattaacagaaacgcagaaactatggttggacgccgataatcatttatccgatagc
aatcttcaggctccagtgctcgaagtggtttctctgtgtggtgaaggttttcgtaatatc
agtctgaccttgaaggcgggagaaattgttggtttggcaggagttgttggagcagggcgt
acagaactggcggaaacgctatacggattgcggcctattgtgagtggcgagatccgtttg
caccaacaggtactcaacccactggatacagcagcacgattgcgatgtggcctgatttat
ctgccggaagatcgacaggcatcgggattgttcctcgatgctcccctgagttggaatgtt
tgttcactgatccacaaccaaagcacgttttggactcgtcctgcttatgatgccgcagtg
cttgagcgttatcgccgggcgctcaatattcgttacagtcatgccaaccaacctgcgcgt
accctgtccggcgggaatcagcaaaagattttgattgccaaatgcttggaagcaaagcca
gccgttttgattattgatgagccgacacgtggtgttgatgtcggcgcacgccatgaaatt
tatcaactgatccgtaacattgccagccagcaagtggcagttttgcttatttcgtctgat
cttgatgaggtcgtacagttggcggatagggtattggttatgcaccacggcgaaatttgt
ggtcaccttgataaatccagcatgagtgtggatgcgattatgcatctttcttttggtgaa
caggaaaatggcgagagggcatcatgctga
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