Xenorhabdus budapestensis: HGO23_01305
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Entry
HGO23_01305 CDS
T07176
Symbol
lsrD
Name
(GenBank) autoinducer 2 ABC transporter permease LsrD
KO
K10557
AI-2 transport system permease protein
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu02010
ABC transporters
xbu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HGO23_01305 (lsrD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HGO23_01305 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xbu02000
]
HGO23_01305 (lsrD)
Transporters [BR:
xbu02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
HGO23_01305 (lsrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
PspB
Motif
Other DBs
NCBI-ProteinID:
QTL40096
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All DBs
Position
321745..322758
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AA seq
337 aa
AA seq
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MNAIKNHGRQRHGWEAALAVLLVLEILLFGMANPRMLDINVLLFSTSDFICIGIVALPLT
MVIVSGGIDISFGAIIGLCAIALGIMNQAGIPMVAALPLTLIAGVLCGLINAGLIFYTGV
NPLVITLGTMYLFGGSALLLSGLSGATGYEGIGGFPAAFTDFANLTLLELPVPLVIFIVC
VIGFWLFMHCTHRGRNVFLIGQNSRVARYAAIPVNKTLCLLYVLTGLASALAAIILVSYF
GSARSDLGSSFLMPAITAAVLGGANIYGGSGSIIGTALAVLLVGYLQQGLQMMGIPNQIS
SALSGALLIMAVVGRSVSLHRHQIRDWWQRWRAMVFQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgattaaaaaccatggtcggcaacgtcatggatgggaagctgctcttgctgtt
ctgttggttctggaaattctgttgtttggcatggcaaatccacggatgctggatattaat
gtattgctgtttagcaccagcgattttatctgtattggtattgtcgccttgccgttaacg
atggtaattgtcagtggtgggattgatatctcgtttggggcgattatcggcttatgtgcc
attgcattagggattatgaaccaggccgggataccgatggttgctgctctccctttgacg
ctgattgcaggcgtgctctgtggtttgattaatgcagggctgattttctacactggcgtt
aatcctctggttattacccttgggacaatgtacctgtttggtggtagcgcattattactg
tcggggttatcgggtgcgacaggttatgaaggcattggcggttttccggctgcatttact
gatttcgctaacctgacattgctggaactgcctgtaccgttagttatctttattgtttgt
gtcatcgggttctggctgtttatgcactgtactcaccgtggacgcaatgtctttctgatt
gggcaaaatagccgtgttgcccgttatgctgcaattcctgtcaataaaacactgtgcctg
ttgtatgtcttaacgggtttagcttctgcgctggctgcgattattttggtgtcttatttc
ggttcagctcgctctgatttgggcagctcgttcctgatgccagctatcactgcggcggtg
ttggggggagctaatatttacggcggctccggctctatcattggcacggcattggctgtc
ctgctggtgggctatttgcagcaggggctacagatgatggggatcccaaaccagatatcc
agcgcattatctggtgctttgctgattatggctgtggtcgggcgctctgtctcactgcat
cgccatcaaattcgtgattggtggcaacgttggcgggctatggtttttcaatga
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