Xenorhabdus budapestensis: HGO23_01310
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Entry
HGO23_01310 CDS
T07176
Symbol
lsrB
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu02010
ABC transporters
xbu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HGO23_01310 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HGO23_01310 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xbu02000
]
HGO23_01310 (lsrB)
Transporters [BR:
xbu02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
HGO23_01310 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Bmp
DUF7765
Motif
Other DBs
NCBI-ProteinID:
QTL40097
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All DBs
Position
322849..323901
Genome browser
AA seq
350 aa
AA seq
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MKAPIVKTLIVKKLVLASALSLACASWAQAADKIAFIPKLVGVGFFTSGGQGAQAAGKDL
GIDVTYDGPTEPSVAGQVQLINNFVNQGYNAIVVSAVSPDGLCPALKRAMQRGVKVLTWD
SDTVPECRSIYIDQGTPKQLGGILVEMAANQVKKDHAVKKDKTKVAFFYSSPTVTDQNQW
VKEAKAKIAAEYPDWEVVTTQFGYNDAAKSLQTAEGILKAWGDLDVIIAPDANALPAAAQ
AAENLKLKDVAIVGFSTPNVMRPYVENGTVKQFALWDVVKQGKIAIHVANEMLKKGNLNV
GDKLVIPDIGTLEVSPNSVQGYSYEAKGNGIVVMPERVIFTKENINQYDF
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaccaatagttaaaacactaatagtgaaaaaactggttttggcaagtgcgtta
agtctggcatgtgcttcctgggcacaagctgctgacaagattgcatttattccgaagctg
gttggtgtcgggttctttaccagtggtggacaaggagcacaggctgcgggtaaagacttg
gggattgatgttacttacgatggcccgactgagccaagtgtggcagggcaggtacagctc
atcaataactttgttaatcagggttacaacgcgattgtggtgtcggcagtatcaccggat
ggtttgtgtccggctctgaaacgtgccatgcagcgtggtgtgaaagtgttgacctgggat
tcagacactgtgccggagtgccgctccatctatatcgatcagggaacgccaaaacaactg
ggtgggatattggtggaaatggctgctaatcaagtgaaaaaagatcatgcagtgaaaaag
gataaaacaaaagtagcatttttctactccagccccactgtgacagatcaaaaccaatgg
gtaaaggaagcgaaagccaagattgcggcggaatatcctgattgggaagttgtgactacc
caatttggttataacgatgccgccaagtctttacagactgcggaaggcattctgaaagca
tggggagatttggatgtgattattgctcctgatgccaatgcgttgcctgcggcggcacaa
gcggcggaaaacctgaaacttaaggatgtggcgattgtcggattcagtacgccgaatgtg
atgcgtccttacgtagaaaacggcacagtcaaacagttcgccctgtgggatgtggtgaaa
cagggcaagatagcgattcatgttgccaatgaaatgttgaaaaaaggcaatttgaatgtg
ggggataaattggttattcctgatatcggtacacttgaggtttcaccgaacagcgttcag
ggatacagctatgaagcgaaaggcaatggcattgttgtcatgccggagcgtgtgattttt
accaaagaaaacattaaccaatacgatttctga
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