KEGG   Xenorhabdus budapestensis: HGO23_02570
Entry
HGO23_02570       CDS       T07176                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
xbu  Xenorhabdus budapestensis
Brite
KEGG Orthology (KO) [BR:xbu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:xbu02048]
    HGO23_02570
Enzymes [BR:xbu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HGO23_02570
Prokaryotic defense system [BR:xbu02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HGO23_02570
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII EcoR124_C HSDR_N DEAD
Other DBs
NCBI-ProteinID: QTL40317
LinkDB
Position
596542..599661
AA seq 1039 aa
MTYTSEAQFEQDVITELCKKGWEDKVLANLTEADLLQNWADILYQNNNSIDRLNNVPLSQ
SEMQQIIEQIIALKTPLKLNGFINGKTVSIKRDNAADTLHYGKEISLNIYDRQEIAAGKS
RYQIVQQPRFERKSAVQHDRRGDLLLLINGMPVIHLELKRSGVPVIEACNQIEKYTHEGH
FTGGIMALVQVFVAMNPDNTLYFANPGKDGIFNHDYYFQWADFSNEPINNWQKVIEGLLS
IPMAHQLIGFYTVADNADGILKVMRSYQYYAANAISNKVASLDWSIKNKGGYIWHTTGSG
KTMTSFKSAQLIANSGDADKVVFLMDRIELGTQSLEEYRSFADASDDVQGTENTYVLIAK
LKSIKPSDNLIVTSIQKMSNIHDEGQLKTADIDCINQKRIVFIVDEAHRSTFGDMLSIIK
ATFPNAVFFGFTGTPIQEENQKKDSTTSTIFGDELHRYSIADGIRDGNVLGFDPCKVMTY
RDDDLREAVALEKAKATSVAEVFADTAKTKIYEKYMDSARVPMATQEINGKKVRGIEELL
PATQYDRIEHKQQVINDILANWVRFSRGNQFHGIFATHSIPDALQYYRLFKQQAPQLKIT
ALFDPNLDNKGNAVTKEAGLVEVIEDYNKTYNTTYTLPTHAQFKKDIAARLAHKKPYQYV
EQQPDQQLHLLIVVAQMLTGYDSKWVNTLYLDKELEYANIIQAFSRTNRLFGIDKPFGNI
RYYRKPHTMELNINKALKLYSGDRPYGVFVEKLEDNLHSLNEKFAEIEIIFKNAKISDFS
QLPKDEETRAKFASLFNEFSKTLEAAKVQGFNWQENSYSFEETGNTVDIDFDENQYQAML
QRYKELSSSSGNGGSAPAVPYAILGYLTKQNTGRIDHNYMNAQFTKFLKQCDQPNVTSEE
MQQTLDELHKSFATLSQAEQKQANKLLLDVQAGNLIIEAGRSLQDYITRAQAEEEDKALQ
VMVDALGLDGKQLKKLTKGNLTAANLNDYGRFDALKATVDKAKAKAYLEDKLGTKLTPPK
VNIELNKLLREFILQGATD
NT seq 3120 nt   +upstreamnt  +downstreamnt
gtgacctacactagtgaagcccaatttgaacaagatgttatcactgaactatgcaaaaaa
ggctgggaagataaggttttagccaacctcactgaagccgatttgctgcaaaattgggcg
gatattctttatcaaaataacaacagtattgatcgcctaaacaatgtgccactcagccag
agtgagatgcagcaaattatagagcaaatcattgcgcttaaaacaccactcaagctaaat
ggttttattaacggtaaaacggtctctattaaacgtgacaatgccgcggacaccctgcac
tatggcaaagagatcagtctcaatatttacgaccgccaagaaatagccgcggggaaaagc
cggtatcaaattgttcagcaacctcgatttgagcgtaaaagtgccgtccaacacgacagg
cgcggtgatcttttgttgctgatcaatggaatgcccgttatccaccttgaactcaaacgt
tcaggcgtcccagtgattgaggcgtgtaatcagattgaaaaatacacccatgaagggcat
tttaccggcggcatcatggcgttagtgcaggtgtttgttgcaatgaatccagataacacc
ttgtattttgctaaccctggaaaggacgggatctttaatcatgattactacttccagtgg
gccgatttttctaatgaacccatcaacaactggcagaaagtgatcgaggggttgctatcc
atcccgatggctcaccaattaattggtttttatactgttgccgacaatgccgatggcatt
cttaaagtgatgcgcagctatcagtattacgctgctaatgccatttcaaataaagttgcc
agcctggactggtctattaaaaataaaggtggctacatttggcataccactggctcgggt
aaaaccatgaccagctttaagtctgcgcaactgattgctaactctggcgatgccgataaa
gtggtgtttttgatggaccgcatcgagttaggaacacaatccttagaggaatatcgcagc
tttgccgatgccagtgatgatgttcaaggaacagaaaatacctatgttctgatcgccaaa
ctgaaaagcataaagccaagcgataacttgattgtgacttcaattcaaaagatgagcaac
atccacgatgaaggacaattaaaaactgcggatatcgactgtattaatcaaaagcgcatt
gtgttcattgtcgacgaagcccaccgttcaacctttggcgatatgctttctatcatcaaa
gccactttccctaatgcggtgttctttggctttacgggaacgccaatccaagaagaaaac
cagaagaaggacagcacaaccagtacgatttttggtgatgagttacatcgttatagcatt
gcggatggtattcgagatggtaacgtgctggggttcgacccttgcaaagtgatgacgtat
cgtgatgatgacttacgcgaggcggttgcgcttgaaaaagccaaagcaacgagtgttgct
gaagtgtttgctgacactgcaaaaactaaaatttatgaaaagtacatggacagtgctcga
gtgccaatggcgacccaagaaatcaatggtaaaaaagtgcgaggcattgaagaattactg
cctgcaacgcaatatgatcgcatagagcataaacagcaagtcattaatgatattctggct
aactgggtacgttttagccgtggtaatcaatttcatggcatttttgccacacacagtatt
cctgatgccttacagtattatcgattattcaaacagcaagctcctcaactgaagataaca
gcgttgtttgatcctaatcttgataacaaaggtaacgccgtgactaaagaggctgggtta
gttgaggttattgaggactataacaaaacctacaatacgacctataccttacccactcat
gcgcaatttaaaaaggatattgcggcacgtcttgcacacaaaaagccttatcaatatgtc
gaacaacaaccggaccagcaattacatttactgattgttgttgctcagatgctcaccggt
tatgactccaaatgggtgaataccctgtatttggataaagaacttgagtatgcaaatatc
attcaagcgttttctcgcactaaccgattgtttggtatcgataaaccttttggcaacatc
cgttattatcgcaaaccgcacactatggaactcaacatcaataaagcgctcaaactctat
tctggagaccgtccttatggtgtatttgtggagaaattggaagataacttacattctctc
aatgaaaaatttgccgaaatagaaatcattttcaaaaacgcgaagatcagcgattttagt
cagttaccaaaagatgaagagactcgtgctaagtttgccagcctgtttaatgagttcagc
aaaaccttagaggcggcaaaagttcaaggttttaactggcaggaaaacagctattcattt
gaagaaacgggtaataccgtggatattgattttgatgagaatcagtatcaagcgatgtta
caacgttataaagagttgtcatcctcttcgggtaatggtggcagtgcgcctgctgtgcct
tatgccattttgggctatttaaccaagcaaaacacggggcgaattgatcataactatatg
aacgctcagttcaccaaatttcttaagcaatgcgatcaaccgaatgtcacgtcagaggag
atgcaacaaacgcttgatgaactgcataaatcctttgctaccttaagccaagcggaacaa
aaacaggcaaacaagctactgcttgatgtacaagcaggtaatttaatcatcgaagcaggc
agatccttacaggattacattacccgtgctcaagcagaggaagaagataaagccttgcag
gtaatggtcgatgctttgggacttgatggtaagcagcttaaaaaactaacgaaaggaaat
ctcaccgccgctaacttaaacgattatggtcgttttgatgcacttaaggcaacagtggat
aaagccaaagctaaggcctatctagaagataaattaggcacaaagctaacgccacctaaa
gtcaatattgaactgaacaagctactgcgggagtttattttgcagggtgccacagattag

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