Xenorhabdus budapestensis: HGO23_03540
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Entry
HGO23_03540 CDS
T07176
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
xbu
Xenorhabdus budapestensis
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbu03400
]
HGO23_03540 (radA)
DNA repair and recombination proteins [BR:
xbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HGO23_03540 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
RecA
GvpD_P-loop
AAA_22
SLFN-g3_helicase
Rad51
AAA_14
ABC_tran
AAA_16
AAA
AAA_24
nSTAND3
NTPase_1
DUF7125
cobW
Herpes_Helicase
Viral_helicase1
AAA_29
Zeta_toxin
AAA_5
Beta-prop_BBS7
DZR
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
QTL40481
LinkDB
All DBs
Position
complement(813731..815119)
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AA seq
462 aa
AA seq
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MAKAAKRAFVCNECGADYPRWQGQCTACQAWNTITEVRLAATSSSSRNDRFSGYAGDAGV
SKVQKLSEISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTMCQLS
EQMKTLYVTGEESLQQVAMRAHRLGLPTDKLNMLSETSIEQICLIAEQEQPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVVIIMVGHVTKDGSLAGPKVLEHCIDCS
VMLDGEADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVNNPSAIFLSRGDEITSGSSV
MIVWEGTRPLLVEIQALVDHSMMSNPRRVAVGLEQNRLAILLAILHKHGGLQMADQDVFV
NVVGGVKVTETSADLALLLSLVSSFRDRPLPRDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFKRAIVPYANMPKKALPGMKTFGVKKLTDALSVLDELDD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagcagcaaaacgggcgttcgtctgtaacgaatgtggggcggattatccccgc
tggcaggggcaatgcactgcatgtcaggcatggaataccattacagaagtgcgtttggcc
gcaacttcatcttcttctcgcaatgatcgtttcagcggttatgcgggagatgccggagtc
agtaaagtacaaaaactttccgaaatcagtttggaagagctacctcgtttttccaccggg
tttaaagagtttgaccgtgtactcggcggtggagtcgtacccgggagtgctattttgata
ggtggtaacccgggcgcaggcaaaagtaccctattactgcaaaccatgtgtcaactatct
gagcagatgaaaaccttatatgtaacgggtgaagaatcgttgcagcaagtggcaatgagg
gcccatcggctaggattgccgacggataaactgaacatgttgtctgaaacaagcattgaa
cagatttgtctgattgccgaacaggaacaacctaaactaatggttattgattctattcaa
gttatgcacatggcagatatccaatcttcacccggcagtgtggcacaagtcagggaaacg
gcggcttacctgactcgatttgctaaaacccgcggtgttgtgatcatcatggttggccat
gtgacaaaagatggttctctggctggcccgaaagtgttggaacactgtatagactgttca
gtgatgttggatggtgaagccgattctcgtttccgtactctccgcagtcataaaaaccgt
ttcggtgcagtcaatgaattgggggtattcgctatgaccgaacagggattgcgggaagtg
aataatccctccgccatcttcttgagccgtggtgatgagatcacctcaggcagctccgtt
atgattgtctgggaaggcactcgtcccttactggtggaaattcaggctttggttgatcac
tccatgatgtcgaatcctcgtcgggtagccgtggggcttgagcaaaatcgtctggcaatt
ctgttggcgatattacacaagcatggtggtttgcaaatggcggatcaggatgtcttcgtt
aatgtggtcggtggggtaaaagtcactgaaaccagcgctgaccttgcattactgctctct
ttggtttccagctttcgtgatcgtcctttgccccgtgatttagtggtattcggtgaggtt
gggctggccggggaaattcgccctgtgcccagcggtcaggagcgtatttcagaagctgcc
aaacacggttttaaacgggcaattgtgccttatgctaatatgccgaaaaaagcattaccg
ggaatgaaaacctttggggtcaaaaaactgacagatgctttatctgttcttgatgaactg
gacgattaa
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