Xenorhabdus budapestensis: HGO23_03865
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Entry
HGO23_03865 CDS
T07176
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu00071
Fatty acid degradation
xbu00280
Valine, leucine and isoleucine degradation
xbu00310
Lysine degradation
xbu00362
Benzoate degradation
xbu00380
Tryptophan metabolism
xbu00410
beta-Alanine metabolism
xbu00640
Propanoate metabolism
xbu00650
Butanoate metabolism
xbu00907
Pinene, camphor and geraniol degradation
xbu00930
Caprolactam degradation
xbu01100
Metabolic pathways
xbu01110
Biosynthesis of secondary metabolites
xbu01120
Microbial metabolism in diverse environments
xbu01200
Carbon metabolism
xbu01212
Fatty acid metabolism
Module
xbu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HGO23_03865 (fadB)
00650 Butanoate metabolism
HGO23_03865 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HGO23_03865 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HGO23_03865 (fadB)
00310 Lysine degradation
HGO23_03865 (fadB)
00380 Tryptophan metabolism
HGO23_03865 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HGO23_03865 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HGO23_03865 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HGO23_03865 (fadB)
00930 Caprolactam degradation
HGO23_03865 (fadB)
Enzymes [BR:
xbu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HGO23_03865 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HGO23_03865 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HGO23_03865 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HGO23_03865 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
QTL40543
UniProt:
A0A2D0J1I8
LinkDB
All DBs
Position
complement(888385..890571)
Genome browser
AA seq
728 aa
AA seq
DB search
MLYLSETIQVNWLKDGIAELIFNAPAAINKLDTKTVTSLDKAVATLEQQSKLKGLLIRSE
KQAFIVGADITEFLSLFSAPAEKLHELLNLANNIFNRIEDLPVPTISAINGYALGGGCEL
VLATDFRIASPDLRIGLPETKLGIMPGFGGSVRMPRLIGTDNALEIITAGKDISAEEALK
NGLVDAVVPAEKLIDAAVSILEQAIKGDLDWKAARQPKLSPLSLNEVERTMSFTVAKGMV
MKVAGPHYPAPITAVKTIEKAATLGRDEALKLESESFVALAHTSVARALVGIFLNDQYVK
SLAKKHLKEVSTPQHAAVLGAGIMGGGIAYQSARKGVPVLMKDINQKALDLGINEAAKLL
NKQFERGRLDAMKMAKMLSSIQPTLNYAGIEQSQVVVEAVVENPKIKAAVLAETESHIND
DCILASNTSTIPITELAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDKTISTVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLLRDGGDFRQIDKIMEKEFGWPMGPAYL
IDVVGIDTAHHAQSVMAQGFPDRMSRDYRDAIDVLFENQRYGQKNGVGFYKYTQDKKGKP
KKEQDETTDQLLADVSQPKQTFSGEEIIARTMIPMINEVVRCLEEGVIASPAEADMALVY
GLGFPPFHGGIFRYLDTMGTAAYVKLAENYAHLGALYQVPAGLKAKAESNESYYPAAAKL
AVNPGETA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctacctaagtgaaactattcaagtaaactggctgaaagatggcattgcagaactg
atcttcaatgcgccagctgcaattaataaattagacacaaaaactgttacatcactagat
aaagccgttgctacccttgagcaacaatctaaattaaaaggattgttaatacgttctgaa
aaacaagcctttattgttggtgcagatattacagaatttttatccttattcagcgcacca
gcagaaaaacttcatgaactgctgaatctcgctaacaatattttcaaccgaattgaagat
cttcctgttccaacaatctccgcaatcaatgggtatgcgcttggcggcggttgtgagcta
gtacttgccactgattttcgtattgcgtcaccagatcttcgaattggtttgccagaaact
aaactaggtattatgccgggcttcggtggctccgtccgtatgccacgcctaattggtact
gacaacgcccttgagattattaccgcaggcaaagatatcagtgcagaagaagcactgaaa
aacggtttagtggatgcggttgtccctgctgaaaaacttattgatgctgctgtttctatt
ttggaacaagccatcaaaggtgacttggactggaaagctgcccgccagcctaagctgtca
ccactgagcctcaacgaagttgagcgcactatgagcttcaccgtggcaaaaggtatggta
atgaaagttgcaggccctcattatcctgctccaattactgccgtgaaaaccattgagaaa
gctgccacattgggtcgtgatgaagcattgaaactggaaagcgagagttttgttgcatta
gcacacacttctgttgctcgcgctttagtcggcattttcctgaatgaccaatatgtaaaa
agtctggcaaaaaaacatctgaaagaagtctccactcctcagcacgcagccgttctgggt
gcaggcattatgggaggcggcatcgcttaccaatcagcacgtaagggtgttccagtgctg
atgaaagatattaatcagaaagcgctggatttaggtattaatgaagcggctaaactgttg
aataagcaatttgaacgcggacgtctggatgcgatgaagatggctaaaatgctgtcatcc
attcaaccaactctgaattatgctggcattgagcagtcacaagttgttgttgaagccgtc
gttgaaaatccgaaaattaaagccgcagttctagcagaaacagaatcccatattaatgat
gactgcattctggcatctaacacctccacaattccaatcactgaactagcaaaatcccta
aaacggccagaaaatttctgtggtatgcacttcttcaacccagttcaccgtatgccattg
gttgagatcattcgtggggaaaaaacatcagataaaacgatttctactgttgtcgcttac
gccagcaaaatgggtaaaacgccaatcgttgtcaatgactgccctggatttttcgtaaac
cgtgtcctgttcccttatctggccggcttcggcatgttattgcgcgatggcggtgatttc
cgtcaaatcgacaaaatcatggaaaaagaatttggctggccaatgggtcctgcttacctc
attgatgttgttggtatcgatactgctcaccatgcccagagtgttatggcgcaaggtttc
cctgaccgtatgagccgcgattaccgggatgccattgatgtattgtttgaaaaccaacgt
tatggtcagaaaaatggtgttggtttctataaatacacccaagacaaaaaaggcaaaccg
aaaaaagagcaagacgaaaccacagatcaattactagcagacgttagtcaacctaaacag
actttctctggcgaagagatcattgcccggaccatgatcccaatgattaacgaggtggtt
cgctgcctggaagaaggtgttattgccagccctgcggaagcagatatggcactggtttac
ggtttaggcttccctccattccacggtggtattttccgctatttggatacgatgggaacc
gctgcttatgtgaaactggctgaaaattatgctcatttaggcgcactttaccaagttcca
gccggtctgaaagcaaaagctgagagcaatgaaagttactaccctgccgcagcaaaactt
gctgttaatcccggtgaaacagcgtga
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