Xenorhabdus budapestensis: HGO23_05975
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Entry
HGO23_05975 CDS
T07176
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HGO23_05975 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbu03400
]
HGO23_05975 (ung)
Enzymes [BR:
xbu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HGO23_05975 (ung)
DNA repair and recombination proteins [BR:
xbu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HGO23_05975 (ung)
Prokaryotic type
HGO23_05975 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QTL40891
LinkDB
All DBs
Position
complement(1298160..1298840)
Genome browser
AA seq
226 aa
AA seq
DB search
MSAPLTWHDVIGNEKTQSYFVDTLAYVANERKAGKTIYPPQQDVFNAFRYTELADVKVVI
LGQDPYHGPNQAHGLAFSVQPGIPAPPSLVNMYKELESDIAGFHHPNHGCLLSWAKQGVL
LLNTVLTVERGNAHSHANLGWETFTDKVIAAINEHRSGVIFLLWGSHAQKKGRIIDTRCH
HVLKAPHPSPLSAHRGFLGCKHFSQANQLLEAQGLTSIDWNPVLPE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacctcttacatggcacgatgtcatcggcaatgaaaagacacagtcctatttc
gttgatacattggcttatgtcgccaatgaacgtaaagcaggcaaaaccatctatccacca
cagcaggatgtttttaatgcatttcgctataccgaactggctgatgtaaaagtggtgatt
ttggggcaagacccttatcatggcccgaatcaagcgcatggactggctttttcagtacag
ccgggtattcctgcaccaccttctctcgtcaatatgtacaaagaactggaatctgacatt
gcagggtttcaccatcccaatcatggctgcctgcttagttgggcaaaacagggggtatta
ctgcttaataccgtgctgacggttgaacgaggcaatgcccactcccatgctaatctgggt
tgggaaacatttactgataaggtaattgcagcaatcaatgaacaccgaagcggtgttatt
ttcctgctttggggttctcacgctcagaaaaaaggccgtattattgatacccgatgccac
catgtcctgaaagcaccacatccttcccctttatcagcacaccgtggtttcttaggttgc
aaacacttttcccaagctaaccagttgcttgaagctcaaggattgacttcaattgattgg
aatccagtattgcctgaataa
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