Xenorhabdus budapestensis: HGO23_08165
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Entry
HGO23_08165 CDS
T07176
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
xbu
Xenorhabdus budapestensis
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbu03400
]
HGO23_08165
DNA repair and recombination proteins [BR:
xbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
HGO23_08165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
DUF7577
AAA_22
zf-tcix
Zn_ribbon_3
SLFN-g3_helicase
AAA_30
TerL_ATPase
Zn_Ribbon_1
RBD
AAA_16
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-ProteinID:
QTL41264
LinkDB
All DBs
Position
complement(1791055..1792812)
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AA seq
585 aa
AA seq
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MAFTLRPYQQEAVDATIRHFRKHKEPAVIVLPTGAGKSLVIAELAKLAHGRVLVLAHVKE
LVAQNHSKYCSYNLKADIFSAGLHQKKSDGKVVFGSIQSVARNSDRFDHNFSLLIIDECH
RISDDENCQYHQIILQLQKNNPHIRILGLTATPYRLGVGWIYQYHYHGMIRGDENCFFRD
CIYELPLRYMIKHHFLVSPERLDMPVIQYDFSQVRTSQQGIFNEADLSREIKRQKRITPH
IVKQIVEYAEDRKGVMIFAATVEHAKEVFLLLPAGQAALVSADTPSTERDLLISAFKKQQ
LRYMVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLFPDKKECLILDYAGNP
HDLYTPEVGSHKPSSQNQPVQVFCPVCQFANTFWGKCTAEGNIIEHFGRRCQGWEEDETG
KRHQCDFRFRFKSCPHCGAENDIAARRCHRCQKVLVDPDDMLKAALKLKDALVLRCGGMQ
LTPGNDNKGEWLKITYYDEDGANVSELFRLTTSGQKKVFELQFMRHHQRAPGIPLHWKTA
GDIAHQLPLLRHPDFVVARKKGQFWQIREKIFDYQGRFRRADDLY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcttttactttacgcccatatcaacaagaagcggtagatgcgaccattcgtcatttc
cgcaaacataaagaacccgcagttattgttttacctactggtgcaggaaaaagccttgtc
attgctgaactggctaaactggctcacggccgggttttagtactggcacatgttaaagaa
ctggttgcacaaaaccatagtaaatattgttcttataacctgaaagcagatatcttttct
gccgggctgcatcaaaagaagagtgacggaaaagttgtctttggcagcattcaatctgta
gcccgcaattcagaccgttttgaccataacttctcactgctaatcattgatgaatgccac
cgaattagtgatgatgaaaactgtcaatatcaccaaattatcctgcaactccagaaaaac
aatccccatatccggatcctaggtttaaccgcgaccccctaccgtttaggcgttggctgg
atttatcaatatcactatcatggcatgatacgtggtgacgaaaattgcttttttcgtgac
tgtatttatgaacttccattacgttatatgatcaaacaccactttctggtttctccagaa
aggttagatatgcccgtaatacaatatgatttcagtcaagtacgtaccagccaacaaggc
attttcaatgaagctgatttgagtcgggaaattaaacgacagaaacgtattacgccacat
attgtcaagcagatcgttgaatatgcagaagatcgaaaaggtgtaatgatttttgctgcc
acagttgaacatgcaaaagaagttttcctgttacttcccgcaggacaggcagcattagtc
agcgccgatacaccgagcactgaacgggatcttctgatcagcgccttcaaaaaacagcaa
ctacgctatatggttaatgtcgctgttctgacaacaggttttgatgcacctcatgtcgat
ctcattgcgatattgcgcccaacagagtccgtgagcctctatcaacagattgttggccgt
ggattacgcctatttcctgataagaaagagtgcctaattttagactatgcgggcaaccct
cacgacctttatacgccagaagtcggcagccacaaacccagttcacaaaatcagcctgta
caagtattctgcccagtctgtcagtttgccaataccttctggggaaaatgcaccgcagaa
ggtaatatcattgaacactttggacgccgttgccaaggatgggaagaagacgaaacagga
aaaagacatcaatgtgattttcgctttcgcttcaaatcatgcccgcattgcggagcagaa
aacgatattgcagcccgacgttgccatcgctgtcaaaaagtgctggtggaccctgatgat
atgctaaaagcagctcttaaactcaaagatgctcttgtactgcgttgtggtggtatgcaa
ttaactccgggtaatgacaataaaggcgaatggctcaaaatcacttattacgatgaagat
ggagcaaacgtatctgaattattccgtttgacaacgtccggtcaaaaaaaagtatttgaa
ctgcaattcatgcgccatcaccaacgagcaccaggcattcctttacattggaaaacagct
ggagatattgctcatcaacttcctttactacgacatcctgattttgttgttgcacggaaa
aaagggcagttctggcagatccgggaaaaaatttttgattatcaaggccgcttccgacgg
gctgatgacctgtattaa
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