Xenorhabdus budapestensis: HGO23_08375
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Entry
HGO23_08375 CDS
T07176
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu03030
DNA replication
xbu03430
Mismatch repair
xbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HGO23_08375 (holB)
03430 Mismatch repair
HGO23_08375 (holB)
03440 Homologous recombination
HGO23_08375 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xbu03032
]
HGO23_08375 (holB)
03400 DNA repair and recombination proteins [BR:
xbu03400
]
HGO23_08375 (holB)
Enzymes [BR:
xbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HGO23_08375 (holB)
DNA replication proteins [BR:
xbu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HGO23_08375 (holB)
DNA repair and recombination proteins [BR:
xbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HGO23_08375 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
DUF6587
Motif
Other DBs
NCBI-ProteinID:
QTL41304
UniProt:
A0A2D0J4C8
LinkDB
All DBs
Position
1838200..1839189
Genome browser
AA seq
329 aa
AA seq
DB search
MNWYPWLNHAYRQLIESHQQGRGHHALLLHAHEGTGADALLYGLSRWLMCQNKQGTKSCG
KCHGCHLMLAETHSDWHVLAPEKGKSVIGVDAIRQLSEKLYEYSQQGGAKIVWLSSTEAL
TDAASNALLKTLEEPPGNTYFLLRCQRPASLLATLRSRCFYYFLPVPENQTGLYWLQNQL
PAISLQDIQTALKLSQGAPLAAKQLLQTEKWQQRTAFCQAITQALYDYDTLSLLPLLNRD
DAQQSLYWLICLLSDAVKWQQKAQNYCINQDQQALIHHLASSQGVEKLLNMVDDWTRCRH
QLISVVGINRELLLTEQLLNWERQLCSTR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaattggtatccgtggcttaaccatgcgtatcgccagttgattgaatctcatcaacaa
ggtcgtggacatcatgctcttttgcttcatgcgcatgaaggaacaggagcagatgcatta
ctttatgggttaagccgctggttgatgtgtcagaataaacaaggcacaaaaagttgtggt
aagtgtcacggctgtcatttgatgctggcagaaacccattctgactggcatgttcttgct
ccagaaaaggggaaaagtgtcattggtgtggatgcaatacgccagcttagtgaaaaactt
tacgaatattctcaacagggcggcgctaaaattgtgtggttatcatcaacagaagcgctc
actgatgcagcttccaacgccttgttgaaaacgttagaagaaccgcccggaaatacctat
ttcttattgaggtgccaacgtccggcgagcttgctggcaacattgcgaagccgctgtttc
tattattttctgcctgtccctgaaaatcaaacagggttgtactggctacaaaatcaactt
ccggcaatatcattgcaggatatccagacggcattaaaattgtcacagggagcgccactg
gctgcaaaacagttactccaaactgaaaaatggcagcagagaacggcattttgtcaggct
attacacaggcattatatgactatgataccttatcacttttgccattattgaatcgtgat
gatgcacaacaatcgttatattggctgatttgcttgctatctgatgcagtgaaatggcag
caaaaggcgcaaaattactgtattaatcaagatcagcaggcgttgatccaccatttggct
tccagccaaggtgtggaaaaattattaaatatggttgatgattggacgcgttgtcgtcat
caattaatatccgtagtgggcatcaatcgggaattgttactgactgaacaattactcaat
tgggaaaggcaactttgctccactcgctaa
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