Xenorhabdus budapestensis: HGO23_10695
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Entry
HGO23_10695 CDS
T07176
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HGO23_10695 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbu03400
]
HGO23_10695 (ruvB)
Enzymes [BR:
xbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HGO23_10695 (ruvB)
DNA repair and recombination proteins [BR:
xbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HGO23_10695 (ruvB)
RecFOR pathway proteins
HGO23_10695 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
Mg_chelatase
AAA_14
AAA_16
nSTAND3
Rad17
AAA_2
TIP49
AAA_18
RNA_helicase
AAA_17
NTPase_1
NB-ARC
Bac_DnaA
AAA_24
AAA_28
bpMoxR
ABC_tran
TsaE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QTL38392
LinkDB
All DBs
Position
complement(2438349..2439356)
Genome browser
AA seq
335 aa
AA seq
DB search
MIEADRLVSAEVLQDDEAIDRAIRPKLLSEYVGQHHVCEQMEIFIQAARQRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYNVDDLQSIVSRSARYMGLSISDDGARQIAMCSRGTPRITNRLLRRVRDFAQVKGDG
SVNGDIAAKALDMLNVDSAGFDYLDRKLLVAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRIATNHAYRHFGLSKESE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagctgaccgtctggtctcagcagaagttctgcaagatgatgaagccattgat
cgcgctatcaggcctaaattgctgtctgaatatgttggtcaacatcatgtttgtgagcag
atggagatctttattcaggctgcgcggcaacggggtgatgcgctggatcatctgctgatt
ttcggcccgcccggattgggtaaaaccacattggcaaatattgttgcaaacgaaatgggg
gttaaccttcgcacaacttcagggccggtattagaaaaagcaggcgatctcgcggccatg
ctgacaaatcttgaacctcatgacgttctgtttatagatgaaatccatcggttgtctccg
gttgtagaagaaattctctatccggcaatggaagattatcagctggatatcatgattgga
gaaggtccggcagcccgttcaatcaaaattgatctccctccgtttaccttagtcggggct
acaacacgcgcaggctctttgacttctcccttgcgcgatcggtttggtattgtacaacgc
cttgaattttataatgtggatgacttgcaaagcattgtttcccgcagtgcccgttatatg
gggttgagtatttcagatgacggagcaaggcaaattgcgatgtgctcccgtggaactcct
cgtattacaaaccgcttactgcgtcgggtacgtgattttgcccaggtaaaaggcgatggt
tcagttaacggtgatattgctgcgaaagcccttgatatgctgaatgtggattcagcaggg
tttgattacctagaccgtaaattactggttgccattattgataaatttatgggtggcccg
gttgggttggataacctcgcggcagcaattggagaagagcgggaaaccatagaggatgtt
ctggaacctttccttatccagcaagggttcattcagcgcacaccacgaggccgtattgca
accaatcacgcctatcggcactttggcttaagtaaagaaagcgagtaa
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