Xenorhabdus budapestensis: HGO23_10720
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Entry
HGO23_10720 CDS
T07176
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HGO23_10720 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xbu01007
]
HGO23_10720 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xbu03016
]
HGO23_10720 (aspS)
03029 Mitochondrial biogenesis [BR:
xbu03029
]
HGO23_10720 (aspS)
Enzymes [BR:
xbu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HGO23_10720 (aspS)
Amino acid related enzymes [BR:
xbu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HGO23_10720 (aspS)
Transfer RNA biogenesis [BR:
xbu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HGO23_10720 (aspS)
Prokaryotic type
Other AARSs
HGO23_10720 (aspS)
Mitochondrial biogenesis [BR:
xbu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HGO23_10720 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
CFAP90
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QTL38397
UniProt:
A0ABX7VEY2
LinkDB
All DBs
Position
complement(2441987..2443756)
Genome browser
AA seq
589 aa
AA seq
DB search
MRTNYCGQLSRAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDKKDAFAQA
SELRNEFCIQITGTIRARPDSQINKDMATGEIEVFAESLEIFNRSEPLPLDSNQNNSEEQ
RLKYRYLDLRRTEMSQRLKTRAKITSFVRRFMDDAGFLDVETPMLTKATPEGARDYLVPS
RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT
SEQVREIMERMIRELWLEVRGVDLGTFPIMTFAEAMRRFGSDKPDLRNPLELVDVADLVK
AVEFSVFAEPANDPKGRVATICVPGGAELSRKQIDEYGKFVGIYGAKGLAWMKVNNRAAG
LEGVQSPIAKFLSAEVVEGLLSRTNAQDGDILFFGADQKNIVTDAMGALRLKLGRDLNLT
DLTSWKPLWVIDFPMFEDDGEGGLVAMHHPFTSPRDMSAEDLESKPESAIANAYDMVING
YEVGGGSVRIHRNDMQQAVFRILGINEEEQQEKFGFLLNALKYGTPPHAGLAFGLDRLVM
LLTDTDNIRDVIAFPKTTAAACLMTEAPSYANPAALEELAISVTKKESE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactaattattgtgggcagttgagccgggcccatgaaggccaaaaagtgactctt
tgtggttgggtaaaccgtcgtcgtgatttgggtggcctgatttttattgatatgcgagat
cgcgaaggtatcgttcaggtattctttgatccggataaaaaagacgcatttgctcaggct
tctgaactgcgtaatgagttttgtattcaaattacggggactatacgtgcccgtcctgac
agccagatcaataaagatatggcaacaggagaaattgaagttttcgctgaaagccttgaa
atcttcaaccgttcagaaccattgccactggacagtaaccagaataacagtgaagaacag
cgcttgaaatatcgctatcttgatctgcgtcgtactgaaatgtcacagcgcttaaaaacc
cgagcaaaaatcaccagttttgttcgtcgttttatggatgatgcgggttttctggatgtg
gaaacaccaatgctgactaaagcaacaccggaaggtgcgcgggattatctagtaccaagc
cgtgttcataaaggcaaattttatgcactgcctcagtctccacagttgtttaaacaatta
ctgatgatgtccggttttgaccgttattatcagattgtaaaatgtttccgtgacgaagac
ctgcgtgcagatcgtcagcctgaatttactcagattgatgtcgaaacctcatttatgact
tctgagcaggttcgtgaaatcatggaaagaatgatccgtgagctatggctggaagtccgt
ggtgtcgatttaggaacgttcccaatcatgacgtttgctgaagctatgcgtcgctttggt
tctgataaaccggatctgcgtaacccgctggaattagttgatgttgctgatctggtcaaa
gcagtggaattttccgttttcgcagaacctgcaaacgatccaaaagggcgtgtagcaaca
atttgtgtaccgggtggtgctgaactgagccgtaagcaaattgacgaatacggtaagttt
gttggtatctatggtgcgaaaggattggcatggatgaaagtcaataatcgagccgcaggt
ctggaaggtgttcaaagcccgattgctaagttcttgtccgcagaagtggtggagggcctg
ttgtcccgcactaatgcacaggatggcgatatcctgttcttcggtgcagatcaaaaaaat
attgtcactgatgcgatgggggcactgcgtctgaaattaggccgtgatctgaatctgact
gatctgacaagctggaaaccactttgggtcattgacttcccgatgtttgaagacgacggg
gagggtgggctggttgcaatgcaccatccatttacttctccacgtgatatgtctgccgaa
gatctggaaagtaagccggaatctgccatcgccaatgcttatgatatggttatcaatggt
tacgaagtgggtggaggatctgtccgtatccatcgtaatgatatgcagcaggcggtattc
cgtattctgggtatcaatgaagaagaacagcaggaaaaatttggcttccttctgaatgca
ctgaaatatggtactcctcctcatgctgggctggccttcggtctggatcgcctcgttatg
ttgttgacggatactgataatatccgtgatgttatcgcatttccgaaaacgacagcggcg
gcatgtctgatgactgaagcaccgagctacgccaatccggcggcactggaagaattagct
atttcagttactaaaaaagagagcgaataa
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