Xenorhabdus budapestensis: HGO23_12335
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Entry
HGO23_12335 CDS
T07176
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu00541
Biosynthesis of various nucleotide sugars
xbu01100
Metabolic pathways
xbu01250
Biosynthesis of nucleotide sugars
Module
xbu_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HGO23_12335 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xbu01005
]
HGO23_12335 (kdsB)
Enzymes [BR:
xbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HGO23_12335 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
xbu01005
]
Lipid A
HGO23_12335 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Peptidase_S24
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
QTL38670
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Position
complement(2860191..2860940)
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AA seq
249 aa
AA seq
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MFTVIIPARFASSRLPGKPLADIHGKPMIVRVMERVIRSGAHRVIVATDNQAIFDAVAAE
GGEVCMTSENHHSGTERLAEVIDKYQFADDEIIVNVQGDEPLIPEQIIKQVADNLAGSDA
GMATLAVQIQDAEEAFNPNVVKVVMDAQGYALYFSRATIPWERDRFMHSKETIGDNFLRH
IGIYAYRAGFIRRYVQWVPSPLEKIEMLEQLRVLWYGEKIHVAKALQAPGAGVDTPEDLD
VARKAFVVL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgtcattattccagcacgttttgcttcatctcgtttacccggaaaaccattg
gccgatatccatggcaagccgatgattgtgcgggttatggaacgagttatccgttctggt
gctcatcgcgtaattgtagccacagataatcaggccatttttgatgcagttgctgctgaa
ggtggtgaagtctgcatgacaagtgaaaatcatcattcaggtacagaacgtttggcggaa
gttatcgacaaataccaatttgccgatgatgaaattatcgtgaatgttcagggtgatgaa
ccacttattcctgaacaaatcatcaaacaagttgctgataacctagcaggaagtgatgct
ggcatggcaacacttgctgtacaaatccaggatgcagaagaagcattcaatcctaatgtg
gtaaaagtcgtcatggatgcgcaaggttatgcgctctatttttcacgtgccacgatcccg
tgggaacgcgatcgttttatgcactccaaagagactatcggagataatttcctgcgccat
atcgggatctatgcctacagagccggatttattcgtcgttatgtacaatgggtgccaagt
ccactggaaaagatcgaaatgctcgagcagttacgggtactttggtacggggaaaaaatt
cacgtggcgaaagcgctgcaagcaccgggcgctggtgtagatacaccggaagatctggat
gtagccaggaaagcttttgtagtactttga
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