Xenorhabdus budapestensis: HGO23_12360
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Entry
HGO23_12360 CDS
T07176
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
xbu
Xenorhabdus budapestensis
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xbu03032
]
HGO23_12360 (ihfB)
03036 Chromosome and associated proteins [BR:
xbu03036
]
HGO23_12360 (ihfB)
03400 DNA repair and recombination proteins [BR:
xbu03400
]
HGO23_12360 (ihfB)
DNA replication proteins [BR:
xbu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HGO23_12360 (ihfB)
Chromosome and associated proteins [BR:
xbu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HGO23_12360 (ihfB)
DNA repair and recombination proteins [BR:
xbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HGO23_12360 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HAAS
HU-CCDC81_euk_2
PSK_trans_fac
HU-CCDC81_euk_1
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
QTL38674
UniProt:
A0A2D0IUE5
LinkDB
All DBs
Position
complement(2866602..2866892)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKSELIERLAEQQSHMPAKAVEDAVKEMLDHMAETLASGERIEVRGFGSFSLHYRAPRV
GRNPKTGDKVELDGKYVPHFKPGKELRDRVNIYSDS
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgagttaattgaaagacttgctgagcaacaatctcatatgccggctaaa
gccgttgaagatgcagtgaaagaaatgcttgatcatatggcagaaacactggcctccggt
gaacgtattgaagttcgcgggttcggcagcttttctcttcactaccgagctccgcgtgtg
ggtcgtaatccaaaaacgggtgataaagttgaactggatggtaaatacgttcctcacttt
aaacccggtaaagaattacgtgaccgcgtgaatatctatagcgacagctaa
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integrated database retrieval system
