Xenorhabdus budapestensis: HGO23_12415
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Entry
HGO23_12415 CDS
T07176
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HGO23_12415 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xbu01007
]
HGO23_12415 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xbu03016
]
HGO23_12415 (serS)
Enzymes [BR:
xbu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HGO23_12415 (serS)
Amino acid related enzymes [BR:
xbu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HGO23_12415 (serS)
Transfer RNA biogenesis [BR:
xbu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HGO23_12415 (serS)
Prokaryotic type
HGO23_12415 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Troponin
CCDC22_CC
UPF0242
DUF2203
Phage_GP20
Vps5
RPW8
CENP-F_leu_zip
End3
Cep57_CLD_2
Sos7
Motif
Other DBs
NCBI-ProteinID:
QTL38683
LinkDB
All DBs
Position
complement(2883566..2884855)
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AA seq
429 aa
AA seq
DB search
MLDPNMLRNELDAVAEKLARRGYTLDVETVRKQEERRKVLQVETETLQAERNSRSKTIGA
AKARGEDIEPLRQEVNQLGEKLDSAKAELEALQAEIRDLALGMPNIPDDSSPDGKDDSDN
VEISRWGEPRQYNFEVKDHVSLGELTDGLDFAAAVKLTGARFVVMKGQIARLHRALAQFM
LDLHTEQHGYLETYVPYLVNRDTLYGTGQLPKFGEDLFHTKALAEDSGSNYALIPTAEVP
VTNLVRGEILDESDLPLRMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKIELVQIVHPEKS
MEALEELIGHAEKVLQLLKLPYRKMLLCTGDMGASARKTYDLEVWLPAQNTYREISSCSN
MWDFQARRMQARFRSKDDKKTQLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRP
YMKGLEYIG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatccaaatatgctgcgtaacgagctagacgcagttgccgaaaaactggctcgc
aggggttatacccttgatgtggagacggtgcgtaaacaagaagagcgccgtaaagtttta
caagttgaaactgaaaccctgcaagcagaacgcaattcccgatcgaagactattggtgca
gctaaagcccgtggtgaagatattgaaccattgcgccaggaagtcaatcaattgggagaa
aagctagattcagcaaaagctgaattagaagcattgcaggctgagatccgtgatctcgca
ttaggcatgccgaatattcctgatgattcttctcctgacggaaaagatgatagtgataat
gtggaaatcagccgttggggtgaaccgcgtcagtataattttgaagtgaaagatcatgta
tcgttgggtgaattaactgatggccttgatttcgccgccgcagtgaaattaacaggtgcg
cgttttgtcgtgatgaaagggcaaattgcccgcctgcatcgtgcattggcgcagtttatg
ctggatctgcatactgaacaacatggttatctggaaacttatgtgccttatctggttaac
cgtgacacgctgtacggtacgggccagttgcctaaatttggtgaagatttgttccatact
aaggcgctggcagaagattccggcagtaactatgcactgatcccaactgcggaagtgcct
gtaactaatttagtacgtggtgaaattctggatgagagtgaccttcctctgagaatgaca
gcgcatacaccttgcttccgctcagaagcgggttcttatggtcgcgatactcgtggtctg
atccgtatgcaccagtttgataaaattgagctggttcaaattgttcatcctgaaaaatcc
atggaagcattggaagagctgatagggcacgcagaaaaagtattgcagttactgaaattg
ccttatcgcaagatgttactgtgtaccggagatatgggtgcgagtgcaagaaaaacctac
gatttggaagtttggttgcctgcgcagaatacttatcgtgaaatctcatcttgctctaat
atgtgggattttcaggctcgtcgtatgcaggctcgtttccgtagtaaagatgacaagaaa
acccagttagtgcatacactgaatggctctggcctggctgtagggcgtacactggttgct
gtaatggaaaactatcagcaggcagatggccgtattgaagttccagaagtattgcgtcct
tatatgaaagggctggaatatattggttaa
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