Xenorhabdus budapestensis: HGO23_13405
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Entry
HGO23_13405 CDS
T07176
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu00020
Citrate cycle (TCA cycle)
xbu00640
Propanoate metabolism
xbu00660
C5-Branched dibasic acid metabolism
xbu00720
Other carbon fixation pathways
xbu01100
Metabolic pathways
xbu01110
Biosynthesis of secondary metabolites
xbu01120
Microbial metabolism in diverse environments
xbu01200
Carbon metabolism
Module
xbu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xbu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HGO23_13405 (sucD)
00640 Propanoate metabolism
HGO23_13405 (sucD)
00660 C5-Branched dibasic acid metabolism
HGO23_13405 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
HGO23_13405 (sucD)
Enzymes [BR:
xbu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HGO23_13405 (sucD)
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Gene cluster
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QTL38869
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Position
complement(3062459..3063334)
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AA seq
291 aa
AA seq
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MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTQMVGGVTPGKGGTQHLGLPVFNTVREA
VETTGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLAVKVKLDQDGVRMI
GPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDAGLGQSTCVGIGG
DPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGTAEEEAAAYIKEHVTKPVVAYIAGVTAP
KGKRMGHAGAIIAGGKGTADEKFAALESAGVKTVRSLADIGDAVKGLLASK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtctattttaattgataaaaacaccaaagtgatttgtcagggtttcactggcagtcag
ggtacttttcattcagaacaagcgatcgcttacggtactcaaatggttggcggtgtgacg
ccaggtaaaggtggcacgcaacatcttggtctgcctgtttttaataccgtccgcgaagca
gttgaaacaacaggtgcgacagcttctgttatttatgtgccagcgccattctgtaaagac
tctattctggaggctattgatgcaggtattaaactgatcattaccattactgaaggcatc
ccaacgctggatatgctggcagttaaggtaaaactggatcaggatggcgttcgcatgatc
ggccctaactgtccgggtgttattactccggatgaatgtaagatcggtattatgcccggt
catattcataaggcaggtaaagtgggtattgtgtctcgttcagggactttgacttacgag
gctgtgaagcagacaactgacgcaggattaggtcaatccacttgtgttggtatcggcggt
gatccaatcccgggttcaaattttattgatattctgaaactgttccaggaagatccacag
actgaagctattgtcatgattggtgaaattggtggtacagcagaagaagaagcggctgcg
tatatcaaagagcatgttactaaacctgttgtggcttacatcgctggtgtaacagcacct
aaaggtaagcgaatggggcatgcaggggcgattattgcaggtggtaaaggtacggcggat
gaaaaattcgcagcattggaatccgcgggagtgaagactgtccgcagccttgctgacatc
ggcgatgcagttaagggtttattggccagcaaatag
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