Xenorhabdus budapestensis: HGO23_16390
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Entry
HGO23_16390 CDS
T07176
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
xbu
Xenorhabdus budapestensis
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xbu03021
]
HGO23_16390 (rpoS)
Transcription machinery [BR:
xbu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HGO23_16390 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QTL39373
LinkDB
All DBs
Position
complement(3724436..3725431)
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AA seq
331 aa
AA seq
DB search
MSQGTLKVNELYEEADLDESGMEADDFDEALLKDEDDLTSLDEDLDLLQGVNQRVLDATQ
LYLGEIGFSPLLTAEEEVLFARRALRGDIAARQRMIESNLRLVVKISRRYSNRGLALLDL
IEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYL
RTARELAHKLDHEPSVEEIAEKLDKPVDDVSRMMRLNERITSVDTPISGDSDKALLDILS
DENDSGPETTIQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAETLEDVGREIGLTR
ERVRQIQVEGLRRLRDILHTQGLNIESLFRT
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggtacgcttaaagttaatgagttgtatgaagaggcggatttagacgaaagt
ggcatggaagccgatgactttgatgaagcgttgctgaaagacgaggatgatttaactagt
cttgatgaagatttggatttgttgcaaggagtaaaccagagagttcttgatgcaacacag
ctttatctcggagagattggtttttctcctttgttgacagcagaggaagaagttcttttc
gccagacgcgcattgcggggagatattgctgcacgccagcgtatgattgaaagtaatttg
cggttggtagttaagatttcccgtagatatagcaaccgagggttggcacttttggatttg
attgaagaaggtaatcttggtcttattcgagcagtagaaaaattcgatcctgaaaggggt
tttcgtttttccacttatgcaacctggtggatccgccagacaattgaacgggctattatg
aatcaaactcgtacgattcgtttgcctattcatatcgttaaagagctaaatgtttattta
cgtacagcgagagagctggctcataaattggatcatgagccaagtgttgaagaaatagcg
gaaaaactggataagccagttgatgatgtaagccgtatgatgcggcttaatgaacgcatt
acttccgttgatacgccaattagtggggattcagataaagcattattggatattttatct
gatgagaatgattcagggccggaaacaactattcaggatgacgatatgaaacaaagtatt
gtcaaatggttgtttgagctgaacgcaaaacaacgtgaagttctggctcgccgttttggt
ttacttgggtacgaagcggaaacattggaagatgtcgggcgagaaattgggttaaccagg
gaaagagtccgtcagatccaagtggaagggttgcgtcgtctcagagacattctgcacacc
cagggtttgaacattgaatcattattccggacttaa
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