Xenorhabdus budapestensis: HGO23_17455
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Entry
HGO23_17455 CDS
T07176
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
xbu
Xenorhabdus budapestensis
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xbu03016
]
HGO23_17455 (rnz)
Enzymes [BR:
xbu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HGO23_17455 (rnz)
Transfer RNA biogenesis [BR:
xbu03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HGO23_17455 (rnz)
Prokaryotic type
HGO23_17455 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QTL39551
LinkDB
All DBs
Position
3962802..3963719
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AA seq
305 aa
AA seq
DB search
MELRFLGTSAGIPTKERNVTSLILDLQAIRSALWMFDCGEGTQHQILNSPIKIRKLEKIF
ITHLHGDHIFGLPGLLCSRSMAGSTAPLTLYGPKGIHQFVKTTLQLSGSFLTYPLEITEV
QPGLLFDDDTMKVTAYALNHRVECYGYRIEEHDKPGVLDAQKLNQDSVPRGPWMQALKQG
KSVTLEDGRTICGKDYLGEPIRGKSLAIFGDTEPTPEALKLATNVDVMVHEITLEDAFAE
KANERGHSTTKQAATLARDAKVRHFIATHISGRYSKEDCPRLLAECREIFPDTDLAEDFS
VFVVK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaattgagatttctgggcacaagcgcaggcattcccactaaagagcgtaatgtcacc
agccttattctggatttacaggcgatccgcagtgcactgtggatgtttgactgtggagaa
ggaacacagcatcaaatccttaattctccaattaagatccgcaaactggaaaagattttt
atcacccatttgcacggcgatcatatctttggtttgccgggcttactgtgcagccgatca
atggcaggctcgaccgctcccttaacattatatggcccaaaaggaatacaccagtttgta
aaaaccacattacaactaagtggctccttcctgacctatccattagaaattaccgaagtg
caaccaggattactgtttgatgatgatacaatgaaagtcacggcttacgctctgaatcat
cgcgtggaatgttacggctatcggattgaagaacatgataaacccggggtacttgatgcc
caaaaactgaatcaggacagtgttccccgtggcccgtggatgcaagcgttgaagcaagga
aaatcggtaacattggaagatggaagaacgatttgtggcaaagactatctgggagaaccg
atacgtggcaaatcactggctattttcggggatacagaacccacaccggaagccctgaaa
ctagccactaatgttgatgtgatggtacatgaaatcacactggaagatgcatttgcagaa
aaagccaatgaacgcggacactctacgactaaacaagctgcaacattggcacgcgatgct
aaggtaagacattttattgcaacacatatcagcggacgctatagcaaagaagattgtcca
cgattattggcagaatgccgggaaatatttcccgatactgatttagctgaagatttttca
gtatttgtggttaaataa
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