Xenorhabdus budapestensis: HGO23_17765
Help
Entry
HGO23_17765 CDS
T07176
Symbol
dacB
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu00550
Peptidoglycan biosynthesis
xbu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HGO23_17765 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xbu01002
]
HGO23_17765 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xbu01011
]
HGO23_17765 (dacB)
Enzymes [BR:
xbu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HGO23_17765 (dacB)
Peptidases and inhibitors [BR:
xbu01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
HGO23_17765 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
xbu01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HGO23_17765 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QTL39606
LinkDB
All DBs
Position
4029481..4030929
Genome browser
AA seq
482 aa
AA seq
DB search
MALLKITSRIAWMLSLSLSIFSANASSIEENIQYLPAGTNFSFIAQKVGEKIPIIDYHGQ
QLALPASTQKIVTALAALLQLGKDFRFVTTLESDANVEDGRLKGNLIARFVGDPSLTRTQ
LRNMVEELKQSGVQQIDGDLIIDISIFSSHDKAPGWVWNDMTQCFSAPPAAAIVDKNCFS
VLLYSAEQADTLATVHVPSYYPVNVFSEVKTLAKGSPETKYCELDVTTGELNRYTLTGCL
TQRSEPLPLAFAIQNGASYVGAILKNELHLAGIELKGHLRRQSLPEQPEKILTLNQSAPL
HDLLRIMLKKSDNMIADTVFRTLGHYYFNVPGTWRSGSDAVRQILKQKAGIDLDNTVLVD
GSGLSRHDLITPSTMMEILQFIAQHNNELDFISMLPQAGYDGTLAYRPGLHEAGVNGKVF
AKTGSLQGVYNLAGFMNAASGQQIAFVQFISSYSVSPENHRQRRVPLTRFESHLYKSLYK
NN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggctcttttaaaaattaccagcagaatagcttggatgctcagtttgagcctgagtatt
ttcagtgcgaatgcctcttcaattgaagaaaatattcaatatttgccagcgggaaccaat
ttttcatttatcgcccagaaagtcggcgaaaaaatacctatcattgattatcatggacag
caattggcattacctgccagtactcagaaaattgtgacagcattagctgccttattacag
cttggcaaagatttccgttttgtcactacattagagagtgacgctaatgttgaagatggc
agattaaagggcaatcttattgcccgtttcgttggtgatccatcgctaacacgcacacaa
ctgcgcaatatggtagaagagttaaaacagtctggtgtacagcagattgatggggatctc
atcatagatatttccattttttccagccacgataaagcacccggctgggtatggaatgat
atgacacaatgttttagtgctcctcctgccgccgccattgtggataagaactgtttttca
gtcttactctacagcgctgaacaagctgatacattagccactgtccatgttccttcgtat
tatcctgtcaatgtattcagtgaagtaaaaacacttgcgaaaggttctccagaaacaaag
tattgtgaacttgatgtaacaacaggagaattgaaccgatatacgctaactggctgcctg
acacaacgtagcgaacccttgccactggcatttgctatccagaatggagcaagctacgtg
ggtgctattctgaaaaatgaactacatcttgctggaattgaactaaaaggccatctacga
cgtcaatcgctccctgaacaaccagaaaagatcctcacattgaatcaatcagcaccttta
catgacctgctcagaatcatgctgaaaaagtcagataacatgatagccgataccgttttt
cgcaccttggggcattattactttaacgttcccggtacctggcgctccggctctgatgct
gttcgtcagatcttaaaacaaaaagcaggtattgatcttgataatactgtcttagttgat
ggttccggcctttcacgccatgatcttatcactccttcaacaatgatggagattttacaa
ttcattgcccagcacaataatgaactggattttatctccatgctgccgcaagcaggttat
gatggtactttagcctatcgtcccggcttgcatgaagctggagttaatggcaaagttttt
gcgaaaacagggtcactacaaggtgtatataatcttgctggctttatgaacgctgccagc
ggacaacagatcgcttttgtccaatttatttcgtcttactccgtctctcctgaaaatcat
cgtcagcgccgtgttcctcttacccgttttgaaagccatttatataaatcgctatacaaa
aacaattga
DBGET
integrated database retrieval system
