Xenorhabdus budapestensis: HGO23_17950
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Entry
HGO23_17950 CDS
T07176
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu02024
Quorum sensing
xbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HGO23_17950 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HGO23_17950 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xbu03019
]
HGO23_17950 (hfq)
03036 Chromosome and associated proteins [BR:
xbu03036
]
HGO23_17950 (hfq)
Messenger RNA biogenesis [BR:
xbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HGO23_17950 (hfq)
Chromosome and associated proteins [BR:
xbu03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HGO23_17950 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
QTL39639
UniProt:
A0A2D0J553
LinkDB
All DBs
Position
complement(4064924..4065226)
Genome browser
AA seq
100 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHGSNANVGSSVGNYQANTSSAAQQENDIAE
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttgcaagatccattcctgaacgcattacgacgtgaaagggtc
ccggtttctatttatttagtcaacggcatcaaattgcagggtcaaattgaatcttttgac
caatttgtcattttgctgaaaaacacagtcagtcagatggtttataaacacgccatttct
actgttgtgccttcccgcccagtgtctcaccatggtagcaatgcaaatgtgggatccagt
gtaggaaattatcaggctaatactagctcggcggcacaacaggaaaatgatatcgctgaa
taa
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