Xenorhabdus budapestensis: HGO23_18155
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Entry
HGO23_18155 CDS
T07176
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu00300
Lysine biosynthesis
xbu00470
D-Amino acid metabolism
xbu01100
Metabolic pathways
xbu01110
Biosynthesis of secondary metabolites
xbu01120
Microbial metabolism in diverse environments
xbu01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HGO23_18155 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HGO23_18155 (dapF)
Enzymes [BR:
xbu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HGO23_18155 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
DUF7234
Motif
Other DBs
NCBI-ProteinID:
QTL39673
UniProt:
A0ABX7VG73
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All DBs
Position
complement(4116188..4117012)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELICRLSDRHTGVGFDQLLVVEAPYDPDLDFHY
RIFNADGSEVSQCGNGARCFARFVRLRGLTNKRDIKVSTRSGHMTLSVTHDDQVCVNMGE
PVFEPQSVPFRANKAEKTYIIRVMDRTVLCGVVSMGNPHCVIQVENVDTADVAVLGPVLE
RHERFPERANIGFMQVMNHNHIRLRVFERGAGETQACGSGACAAVAVGIQQNLLDKQVRV
DLPGGSLNILWAGSGQPLYMTGPATHVYDGTIHV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctccaaaatgcatggtcttggcaatgattttatggtcgttgatgcagtgacc
cagaatgtttatttttcaccggaattaatctgccggttatcggatagacatactggtgtg
gggtttgatcaactgctggttgttgaagcaccctatgatcctgacctagacttccactat
cgtatttttaatgcggatggcagtgaagtttctcaatgtggtaatggagcgcgttgtttt
gctcgttttgtccgtttaagaggattgacgaataaacgtgacattaaagttagtacgcgg
tctggtcatatgacgctgagtgtgacgcacgatgatcaggtctgtgtcaatatgggcgag
ccagtctttgaaccgcagtccgtccctttccgcgctaacaaagcagaaaaaacctatatt
atccgggtcatggatcgtacggtgctctgtggtgttgtatcaatggggaaccctcactgt
gttattcaggttgagaatgtggacaccgcagatgttgcagtgcttggccccgttttagag
cgtcatgaacgttttcctgagagagcgaatattggttttatgcaggtcatgaatcataac
catatccgattgcgtgtctttgagcgaggtgccggagaaacgcaggcgtgtggcagtggc
gcttgtgctgctgttgctgttggtatccagcaaaatctgttagataagcaggttcgcgtt
gatttgccaggcggttccctgaatattctctgggctgggtcagggcagccactttatatg
accgggcctgcaactcacgtttatgacggcacaattcatgtgtag
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