Xenorhabdus budapestensis: HGO23_18290
Help
Entry
HGO23_18290 CDS
T07176
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HGO23_18290 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xbu03019
]
HGO23_18290 (rhlB)
Enzymes [BR:
xbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HGO23_18290 (rhlB)
Messenger RNA biogenesis [BR:
xbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HGO23_18290 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTL39695
LinkDB
All DBs
Position
4144096..4145379
Genome browser
AA seq
427 aa
AA seq
DB search
MSKTHLTEKKFSDFALHPKVIEALNKKGFSNCTPIQALTLPFTVEGQDVAGQAQTGTGKT
LAFLASTFHYLLTHPAKAEHKTNQPRALIMAPTRELAVQIYSDAEELAEVTGLKMGLAYG
GDGYDKQLKVLESGVDIIIGTTGRLIDYAKQGYINFNAIQVIVLDEADRMYDLGFIKDIR
WLFRRMPAATERMNLLFSATLSYRVRELAFEQMNNPKYVEVEPLQKTGHRIREELFYPSN
EEKMRLLQTLLEEEWPDRCIIFANTKHRCEDIWAHLAADGHRVGLLTGDVAQKKRLRILE
EFSLGNLDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYALNLPAIEEYIRHQIPVSKYNSDTLLKDLPVPKRRNRARSGGHPRRTNMTRRGNTV
HNRKRNS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttgacagaaaagaagttttccgacttcgcattgcaccccaaggtc
attgaagcccttaataaaaagggtttttccaactgtacaccgatacaggcgctaacattg
ccttttactgtcgaaggccaagatgttgcggggcaagcacaaaccggaacgggcaagacg
ctcgcatttctggcgtctacttttcattatttactgactcatcccgccaaggcggagcat
aaaaccaatcaaccaagagcgttgattatggctccgacccgtgagctggccgtccagatc
tactctgacgcagaagagctagctgaagtcacagggttaaaaatgggtctggcctatggt
ggagatggctatgataaacagctaaaggtgctggaatctggcgttgatatcatcattggc
acaacgggtcgtcttattgattacgccaagcaggggtatatcaatttcaacgccattcag
gttatcgtactggatgaagccgaccgcatgtacgatctcggttttatcaaggatatccgt
tggttattccgtcggatgcctgctgcaactgaacgcatgaatctgctgttttccgccacc
ttgtcttatcgggtgcgtgaactggcctttgaacagatgaacaatcctaaatatgtggaa
gtggaaccattacaaaaaacgggacaccgcatccgggaagaacttttttatccttccaat
gaagaaaaaatgcgtctgctacagaccttattggaagaagagtggcccgaccgctgcatt
attttcgcgaataccaaacaccgctgcgaagatatctgggctcatctggctgccgatgga
catcgtgtcggtctgctgaccggtgatgtagcacagaaaaaacgcctgcgcatattggaa
gaattcagtctgggcaatctggatattttggtcgccaccgatgttgctgcacgtgggctg
catatcccttccgtaacacacgtgtttaactatgatttgccggatgattgtgaagattac
gttcatcgtatcggccgaacgggccgtgccggcgaaagcggccattcaatcagtctggcc
tgtgaagaatatgcgctgaatctgccagccattgaagaatatatccggcatcagatccct
gtgagcaaatataacagcgatacattactgaaagatttaccagtgcctaaacgccgcaac
cgcgcacgttcaggaggacatccgcgccgtaccaatatgacgcgccgtggtaatactgtt
cataatcgtaaacgcaattcgtaa
DBGET
integrated database retrieval system
