Xenorhabdus bovienii CS03: XBW1_0369
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Entry
XBW1_0369 CDS
T03845
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv03030
DNA replication
xbv03410
Base excision repair
xbv03420
Nucleotide excision repair
xbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XBW1_0369 (polA)
03410 Base excision repair
XBW1_0369 (polA)
03420 Nucleotide excision repair
XBW1_0369 (polA)
03440 Homologous recombination
XBW1_0369 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xbv03032
]
XBW1_0369 (polA)
03400 DNA repair and recombination proteins [BR:
xbv03400
]
XBW1_0369 (polA)
Enzymes [BR:
xbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XBW1_0369 (polA)
DNA replication proteins [BR:
xbv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XBW1_0369 (polA)
DNA repair and recombination proteins [BR:
xbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
XBW1_0369 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XBW1_0369 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
CDM87728
UniProt:
A0A0B6X4U6
LinkDB
All DBs
Position
356862..359708
Genome browser
AA seq
948 aa
AA seq
DB search
MAFYALIIPQNDEENFMAQIADNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLN
MLRSLIIQYKPSHVAVVFDAKGKTFRDELFAEYKSHRPPMPDDLRGQIEPLHKMVEAMGL
PILVVPGVEADDVIGTLALQAEKEGRSVLISTGDKDMAQLVTPHITLINTMTNTILGPEG
VSEKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTALGLLQGIGSLDDIYARLDEIATL
SFRGAKTLSGKMEQHKEVAYLSYQLATIKTDVELNKTCLELAVTAPDSDELLALFSRYEF
KRWLSDVQNGSWLEGNSQKPAAAGATANSAPAGSAPVAVNISSENYQTILDRKSLDEWIV
KLKQAPAFSFDTETDGLDTLTVNLVGMSFAIAVGESEVEAAYLPLGHDYLDAPEQLDLHE
VLAALKPLLEDANLPKIGQNLKFDRGVLARYDVALNGIVFDTMLESYVLNSVSGRHDMDS
LADRHLGYKTTTFEEIAGKGKKQLTFNQIPLEEAAKYAAEDADVTLRLHQAMYPQVDSVP
TLKSIFQNIEMPLVPVLSCIERTGVLIDAQTLAEHSTEITARLGELEKAAYELAGEEFNL
ASPKQLQVILFEKLNLPVLKKTPNGAPSTNEEVLEELADNHELPRVILEHRGLAKLKSTY
TDKLPQMVNPLTKRVHTSYHQAVTATGRLSSRDPNLQNIPVRNDEGRRIRQAFIAPEGYR
IMAADYSQIELRIMAHLSQDKGLLEAFAQGKDIHSATAAEVFGVPLEKVTSEQRRSAKAI
NFGLIYGMSAFGLSRQLSIPRGEAQRYMDLYFERYPGVLAYMERTRQQAAEHGFVETLEG
RRLYLPDIKSRNAMRRKASEREAINAPMQGTAADIIKLAMIAVDNWIVSEQPNVRMIMQV
HDELVFEVHESELAIAEQKVSELMEKSMQLDVPLKVDVGIGINWDQAH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcattctacgctttaatcatcccacagaacgacgaagaaaattttatggcacagata
gcagacaatcccctgattttggttgatggttcttcatacctttatcgtgcataccatgcg
tttcctccgctgaccaatagtgcgggagaaccaacgggcgccatgtatggtgtcctgaat
atgctgcgcagcttaatcatccagtataaacccagtcatgtggcggtcgtgtttgatgcc
aagggcaaaacgttccgtgatgagttatttgctgaatataaatctcatcgtcccccgatg
ccggatgatttacgtgggcagattgaaccgctgcacaaaatggtcgaggcaatggggctg
ccgattctggttgtgccgggcgtcgaagctgatgacgttattggtacactggcattgcag
gcggaaaaagaagggcgttccgttctgatcagtacgggcgataaagatatggctcagttg
gttacgccccatatcacgctgattaacaccatgactaacaccattctggggccggaaggg
gtttcggagaaatatggtgttccccctgaattgatcatcgattttctcgctctgatggga
gactcctctgataatattcccggcgtaccgggtgtcggtgagaaaacagcgctgggatta
ttgcagggtatcggcagtctggatgatatctatgccagacttgatgagatcgcgacactc
agcttccgtggcgctaaaacgctgagtgggaaaatggagcagcacaaagaggtggcttac
ctttcttatcaattggcaacgattaaaacggatgttgagctgaataaaacctgtctggag
cttgcggttacagcccctgacagcgatgaactgttggcgctgttcagccgctatgaattc
aaacgttggttgagcgatgtacagaatggcagttggttggaaggtaatagccaaaaaccc
gctgcggcaggtgctacggctaactcagctcccgccggcagtgcaccggttgctgtcaat
atttcgtcggaaaattatcaaaccatccttgaccggaaatcccttgatgagtggattgtg
aagctgaaacaggctccggccttctcttttgatactgagacagacggacttgatacgttg
acagttaatctagtcggcatgtcttttgctattgcggtgggagaatcagaggttgaagcg
gcatatctgccgttggggcatgattacctcgatgcaccagaacaactggatctgcatgaa
gttctggcggcattaaaacccctgctggaagatgcaaacctgcctaaaattggtcagaac
ctgaaatttgatcgtggggtgctggcacgttacgacgtcgctttgaatggcattgttttt
gataccatgctggagtcgtatgtcctgaacagtgtgagcggacggcatgacatggatagc
ctggcagatcgtcatctgggatataaaaccacgacttttgaagaaatcgcgggcaagggc
aaaaagcagcttaccttcaatcaaatcccgctggaagaagcggcaaaatatgcggctgaa
gatgcggatgtgactttacggctgcaccaagccatgtatccacaggtcgacagtgtgccg
acgctgaaaagcatcttccagaacatcgaaatgccattggtgccagtgctttcctgcata
gagcgaaccggcgtgctgatcgatgcccagacactggctgaacactcaacggaaatcact
gcgcggctgggagaattggaaaaagccgcttatgaactggcgggtgaagagttcaatctg
gcttccccaaaacagttacaggtcattctctttgaaaagctgaacctgcctgtactgaaa
aagacgccaaatggggcgccatcgaccaatgaagaagtgttggaagaactggccgataac
catgaactgccgcgggtgattctggaacatcgcggtttggcaaaactgaaatccacttat
accgacaaactgccgcagatggttaacccgctcactaaacgagttcatacctcttatcat
caggcagtaacagcgaccggacgcctttcttcccgtgatcctaacctgcaaaacattcct
gtccgtaatgacgaggggcgacgtatccgtcaggcatttattgcaccggaaggttatcgc
atcatggcggcggactattcgcagatagaattgcggattatggcgcatctgtcacaggat
aagggcttgctggaggcttttgcgcagggtaaggatattcacagtgcgacggcggctgaa
gtctttggcgtgccactggaaaaagtgaccagcgaacagcgccgcagtgcgaaggcgatc
aattttggtctgatttatggcatgagtgcgtttggtctatcccgccagttaagtattcca
cgcggagaagctcaacgctatatggatctctattttgaacgctatccgggggtactggcc
tatatggaacgtacacgccagcaggcggctgagcatggttttgttgaaacgttggaaggg
cgtcgcctttacctgccggatatcaaatcgcgcaatgccatgcgccgcaaggcttctgag
cgtgaggcgattaacgcgccaatgcagggaacggcggcggatatcatcaaactggcaatg
atcgcggtggataattggatcgtcagtgagcagccaaatgtacgcatgattatgcaggtg
cacgatgaactggtatttgaggttcatgaatcagaactggcgatagcggagcagaaagtc
agtgagttgatggaaaaaagtatgcagcttgatgtgccgttaaaagtggatgtgggaatt
gggatcaactgggatcaggctcactga
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