Xenorhabdus bovienii CS03: XBW1_0561
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Entry
XBW1_0561 CDS
T03845
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv02020
Two-component system
xbv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XBW1_0561 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
XBW1_0561 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xbv03021
]
XBW1_0561 (rpoN)
Transcription machinery [BR:
xbv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XBW1_0561 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
CDM87918
UniProt:
A0A0B6X5C3
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All DBs
Position
complement(555366..556805)
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AA seq
479 aa
AA seq
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MKQSLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQQALEANPLLEQDDPHEEIDSQE
SPDAATEVMDTREALEQKDIPEELPLDASWDEIYTAGTPSGTNSDYSAEDFPVYQGETTQ
TLQDYLMWQAGLTPFTETDSAIATSIIDAIDDSGYLTVSIEEILASIGDDELMLEEVEIV
LKRIQHFDPIGIAARDLRECLLIQLSMLSTETPYLNEAKLVVSKYLELLGNRDFRNLLRQ
SKLKENALKEAIDIIQSLEPKPGLVVNTGESEYVIPDVLAHKKNESWQVKLNTDSIPRLR
INQHYAALGQQSHSESDSLFIRNNLQEAKWLIKSLESRNDTLLKVASCIVERQQDFFEYG
AEHMKPLVLADIAYQVEMHESTISRVTTQKYLYSPRGIFELKYFFSSHVNTDSGGEASST
AIRALVKKLVAAENPAKPLSDSKLTSILAEQGIQVARRTVAKYRESLSIPPSNQRKKLV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagtttgcaactcaggctcagtcagcaactggcgatgacgccacaactccag
caagctatccgtttgttgcaactttctacgcttgagcttcaacaagagatccagcaggct
ttggaagctaacccactgcttgaacaggatgatccgcatgaggaaattgacagtcaggaa
tcccctgatgcggcaactgaggtgatggatacccgcgaagcgcttgaacagaaggatata
ccggaagaactgccattggatgccagttgggatgaaatttacacggctggcactccttcg
gggacaaacagcgattacagtgctgaggattttcccgtctatcaaggtgaaaccactcag
acactgcaagactatctgatgtggcaggcagggttgacgccgtttactgaaacggattct
gccatcgccacctccatcattgatgcgattgatgattcaggctatctgacagtttcaatc
gaagagatccttgccagcattggcgatgatgagctgatgctggaagaagtggaaatcgta
ctcaaacgcatacagcatttcgatccgattggtatcgccgcccgcgatttgcgtgaatgc
ctgcttattcaactttcgatgctgtcaacagaaacaccttacctgaacgaagccaaactg
gttgtcagcaaataccttgaactattgggcaatcgagactttcgtaatttgttacgtcag
agcaaattaaaggaaaacgccctgaaagaagccatcgatattattcaatcattggaaccc
aaacccggattagtggtcaatacaggtgaatccgagtatgttattcctgatgtgcttgct
cataaaaaaaatgaaagctggcaagtcaaactgaataccgatagcatcccccgtctgcgc
atcaatcaacactacgcagcgttggggcaacagtcccatagtgaaagcgacagtctgttc
attcgcaataatctgcaagaggccaagtggctgataaaaagcctcgaaagccgtaatgac
acgttattgaaagttgccagttgcattgttgaacggcaacaagatttttttgaatatggt
gcagagcacatgaaaccgctagtactggcagatatcgcctatcaggttgaaatgcacgaa
tccaccatttcccgtgtgacaacacagaaatatctgtatagcccacggggcatttttgaa
ttgaaatattttttctccagccatgtcaataccgatagcggaggtgaagcctcttctact
gcgatacgggcactggtgaaaaaattggtcgcggcagaaaacccggccaagccactgagt
gacagcaaattgaccagcatactggccgaacagggcattcaagtagcgcgtcgaactgtc
gcaaaatatagagagtcgttatccatcccgccttcaaaccaacgcaaaaaactggtttga
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integrated database retrieval system