KEGG   Xenorhabdus bovienii CS03: XBW1_0561
Entry
XBW1_0561         CDS       T03845                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
xbv  Xenorhabdus bovienii CS03
Pathway
xbv02020  Two-component system
xbv02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:xbv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    XBW1_0561 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    XBW1_0561 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xbv03021]
    XBW1_0561 (rpoN)
Transcription machinery [BR:xbv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     XBW1_0561 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: CDM87918
UniProt: A0A0B6X5C3
LinkDB
Position
complement(555366..556805)
AA seq 479 aa
MKQSLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQQALEANPLLEQDDPHEEIDSQE
SPDAATEVMDTREALEQKDIPEELPLDASWDEIYTAGTPSGTNSDYSAEDFPVYQGETTQ
TLQDYLMWQAGLTPFTETDSAIATSIIDAIDDSGYLTVSIEEILASIGDDELMLEEVEIV
LKRIQHFDPIGIAARDLRECLLIQLSMLSTETPYLNEAKLVVSKYLELLGNRDFRNLLRQ
SKLKENALKEAIDIIQSLEPKPGLVVNTGESEYVIPDVLAHKKNESWQVKLNTDSIPRLR
INQHYAALGQQSHSESDSLFIRNNLQEAKWLIKSLESRNDTLLKVASCIVERQQDFFEYG
AEHMKPLVLADIAYQVEMHESTISRVTTQKYLYSPRGIFELKYFFSSHVNTDSGGEASST
AIRALVKKLVAAENPAKPLSDSKLTSILAEQGIQVARRTVAKYRESLSIPPSNQRKKLV
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgaagcaaagtttgcaactcaggctcagtcagcaactggcgatgacgccacaactccag
caagctatccgtttgttgcaactttctacgcttgagcttcaacaagagatccagcaggct
ttggaagctaacccactgcttgaacaggatgatccgcatgaggaaattgacagtcaggaa
tcccctgatgcggcaactgaggtgatggatacccgcgaagcgcttgaacagaaggatata
ccggaagaactgccattggatgccagttgggatgaaatttacacggctggcactccttcg
gggacaaacagcgattacagtgctgaggattttcccgtctatcaaggtgaaaccactcag
acactgcaagactatctgatgtggcaggcagggttgacgccgtttactgaaacggattct
gccatcgccacctccatcattgatgcgattgatgattcaggctatctgacagtttcaatc
gaagagatccttgccagcattggcgatgatgagctgatgctggaagaagtggaaatcgta
ctcaaacgcatacagcatttcgatccgattggtatcgccgcccgcgatttgcgtgaatgc
ctgcttattcaactttcgatgctgtcaacagaaacaccttacctgaacgaagccaaactg
gttgtcagcaaataccttgaactattgggcaatcgagactttcgtaatttgttacgtcag
agcaaattaaaggaaaacgccctgaaagaagccatcgatattattcaatcattggaaccc
aaacccggattagtggtcaatacaggtgaatccgagtatgttattcctgatgtgcttgct
cataaaaaaaatgaaagctggcaagtcaaactgaataccgatagcatcccccgtctgcgc
atcaatcaacactacgcagcgttggggcaacagtcccatagtgaaagcgacagtctgttc
attcgcaataatctgcaagaggccaagtggctgataaaaagcctcgaaagccgtaatgac
acgttattgaaagttgccagttgcattgttgaacggcaacaagatttttttgaatatggt
gcagagcacatgaaaccgctagtactggcagatatcgcctatcaggttgaaatgcacgaa
tccaccatttcccgtgtgacaacacagaaatatctgtatagcccacggggcatttttgaa
ttgaaatattttttctccagccatgtcaataccgatagcggaggtgaagcctcttctact
gcgatacgggcactggtgaaaaaattggtcgcggcagaaaacccggccaagccactgagt
gacagcaaattgaccagcatactggccgaacagggcattcaagtagcgcgtcgaactgtc
gcaaaatatagagagtcgttatccatcccgccttcaaaccaacgcaaaaaactggtttga

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