Xenorhabdus bovienii CS03: XBW1_0991
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Entry
XBW1_0991 CDS
T03845
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
xbv
Xenorhabdus bovienii CS03
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbv03400
]
XBW1_0991 (sbcC)
DNA repair and recombination proteins [BR:
xbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XBW1_0991 (sbcC)
Archaeal homologous recombinant proteins
XBW1_0991 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
ABC_tran
cobW
NTPase_1
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CDM88348
UniProt:
A0A0B6X6M7
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All DBs
Position
947037..950723
Genome browser
AA seq
1228 aa
AA seq
DB search
MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
FRNNSISATQNELMTRHTAECLAEVEFEVKGIAYRAFWSQHRARNQAEGKLQDPKVELAL
KADGKILADKVKGKKEKITEITGLDFERFTKSILLSQGDFAAFLNADDKDRADLLEELTG
TEIYGILSQEIYQRHKQAQSELNIQQATASGIELLTPEQIEKYQNEQQQLIAAETQLSQQ
IKAFQSAEQWLIRQDELQQSITSSTALLQQTERTIQDAQPQLQQLAASEPAEKIRSLWDA
QNRAFSEKQRVTEQRIKIEHDRQQQLSLLQPVQQQLTDLEKTQGEHQQKQIQQEKLITEQ
IMPLDHKIDTQSKDLLTLEKEITRQNRELTEISTQYQVAQNRKDTLHNEQKTLETYYDQH
PYCRNLDNKLPEWKQLFSRQKEKQIQIAKFTQKTQQISTELARITHHLNTLNTELAKQTE
QNQPLHDNLILTEKQLTDLQKSHPPEQLQKQLSDYQQQLKSQNQLEILLPQIRQLQTTIS
INQTQSAQYQALLEPLPMQISALDQQLTEKKQHYEDLADRIRLEQRITSLEQERSQLKEG
EACPLCGSTQHPLVAEYQNIALSQSEERLKSLRHQIEQLQTNRSALQQKQQIQQQNNQQL
QQNTAQLTEKLTETTQQWKHHCQQLQAAELPMETEPVNNFIGQRQSAAQQHQRQYEALLQ
AEKAHQAAEKALSANREQHKASEQTIELEKVKLDSHQKQLAENTAELRQAKTEYTATTEL
LVSDLQHTPFALPSLQEVTIWLQQRETELKTYHDSRERWQQLQQEQAALQSQSNELEKQK
TKLTIRLHALNEKQQQQKQLLEQTTQERHHLFGEQSVSNVRQTLQQKTNELDIACKQATS
HLQQRQNVMNQLTGAASEIERNSNTAETQCKLAASAFQSGLEQQGFADQSAFEQVLLEPE
QRKKLQQLQEQLTQHHLQAKTRHHESETALQRHTETQPQLLEQYEPTQVSTVLADVNEKL
KHNNQQQGEVKTILNSDAMRRQKQQTLLAQISHLQQNYDDWSYLNNLIGSADGAKFRRFA
QGLTLDHLIHLANIRLEKLHGRYDLQRKDEGGLELQIIDTWQADAVRDTKTLSGGESFLV
SLALALALSDLVSNKTQIESLFLDEGFGTLDPETLNIALDALDHLNASGKTIGVISHVEA
MKERIPVQIKVEKVNGLGVSRLASEFRV
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttagcttacggctgaaaaatatcaactctctgcaaggtgaatggaaaatt
gattttacggcagagccttttgccagcaatgggttattcgccatcacaggcccaacagga
gcaggaaaaaccaccttgctggatgccatctgccttgccctttaccacgaaacaccacgg
ttcagaaacaactctatttctgccacccagaatgaattaatgacccgccataccgctgaa
tgtctggctgaagtggaatttgaagtcaaaggcatagcctaccgtgcattctggagccag
caccgtgcccgcaatcaggctgaaggcaaactacaagatccaaaagttgaattggcgctt
aaagcggatggtaagattctggctgataaagtgaagggtaaaaaagaaaaaatcactgaa
ataaccggacttgatttcgaacgttttaccaaatccatcctactgtcacagggtgatttt
gccgcatttttaaatgcagatgataaagatcgggctgatttgctggaagaactaacgggt
acagaaatttacggcattctgtctcaggaaatttatcaacgtcataaacaagcccaatct
gaactgaatattcagcaggccactgcttccggcattgagttattaaccccagagcaaata
gaaaaataccagaacgaacagcagcaacttattgcggcagaaactcaactcagccaacag
attaaggcttttcaatctgccgaacagtggcttatccggcaagatgagttacaacaatca
ataaccagcagcactgcacttttgcaacagactgagcgaaccatacaagacgctcaacct
caattacaacaacttgccgccagcgaacccgcagaaaaaatccgttcactatgggatgcg
caaaaccgagcctttagcgaaaaacaacgagttactgaacagcgtataaaaatagaacat
gatcgccagcaacaactttctttgttacagccagttcaacaacagcttacagatttggaa
aaaacgcagggagaacaccagcagaagcaaatccaacaggaaaaactcatcacagagcag
attatgccactcgatcacaagattgatactcaatcaaaagatctgcttaccctagagaag
gaaataaccaggcaaaaccgtgagctgacagaaatttccacccaataccaagtagcacaa
aatcgcaaagatacgctgcataatgaacaaaaaacgctggaaacatactacgatcagcac
ccttattgccgtaatttagacaacaaactccctgagtggaaacagctattttcacgtcag
aaagagaagcaaatacagatagccaaatttacacaaaaaacacagcagattagcactgaa
ttggctcgtataacccatcacttgaatacattaaatacagagttagccaaacagacagag
caaaaccagccactgcacgacaatctgatacttaccgaaaaacaactgactgatttgcag
aaaagtcatccaccggaacaattgcaaaaacagttatcagactatcagcaacaactgaaa
tcacagaatcaacttgagatattattgcctcagatccggcaattacagaccacaatctca
atcaatcagacccagtcagcacagtatcaggcattactggaacccttgccgatgcagatc
agcgcactagatcaacagctaacagagaaaaaacagcattatgaagatcttgctgatcga
attcgtttggaacagcgaatcaccagcctggaacaggagcgttcacagttaaaagaaggc
gaagcctgcccactgtgcggttccacacaacaccctttagtcgctgaataccagaacatt
gccctgtcacaatcagaagaacgcttaaaatctctacgtcatcaaatagagcagctacaa
acaaaccgttctgccctacagcagaaacagcagattcaacagcaaaataatcaacaatta
cagcaaaatacggctcaattaaccgagaaactgacagaaacaacgcaacagtggaagcac
cactgccaacagttacaagccgctgaattaccaatggaaacagaacccgtgaacaatttc
attggtcaacggcaatctgccgctcagcagcatcaaaggcaatacgaagcattattacaa
gcagaaaaagcacatcaagcggcggaaaaagcgctgtcggccaatcgtgaacagcacaaa
gcatctgaacaaactattgagctggaaaaggtcaaattagattcacaccaaaaacaactg
gcagaaaacacagcagagcttcgacaggcaaaaactgaatacacagccacgacagagcta
ttagtcagcgatttacaacatacgccttttgctctgccctctctgcaagaagtcacaatc
tggctgcaacaacgcgaaactgagttaaaaacctaccatgattcacgcgaaagatggcaa
cagttacagcaagaacaggctgccctgcaaagtcaatcgaatgaattagagaagcaaaaa
actaagctgacgatccgccttcatgccctgaacgaaaaacagcagcagcaaaaacagtta
ctggaacaaacaactcaggaacgtcatcatttatttggggaacaatccgttagcaacgtt
cgtcagacattacagcaaaaaactaatgagctggacatcgcttgcaaacaggctacttca
cacctgcaacagcgacaaaacgtgatgaaccaactcactggtgcagctagtgaaattgaa
agaaacagcaataccgccgaaacacaatgcaaacttgccgccagcgctttccaaagcgga
ttggaacaacagggatttgccgatcaatctgcctttgaacaggtcctgctggaacctgaa
caacggaaaaagctgcaacaattgcaagagcagcttacacagcatcatttgcaagccaaa
acacggcaccatgaatcagaaaccgccttacagcgacacactgaaacacagccccaatta
cttgaacaatatgaaccgacgcaagtctccacggtattggctgacgttaacgaaaaattg
aaacataacaatcagcaacaaggtgaagtcaaaaccatactgaacagtgatgctatgcgt
cggcagaagcaacaaacactcctggcacaaatttcccacttacaacaaaactacgatgac
tggagttacctcaataacctgattggttccgcagacggtgctaaattccgccgctttgct
caaggattaactctggatcatttaatccatctggcgaatattcgactggaaaaattacat
gggcgctacgatttgcaacgtaaagatgagggtgggctggaattgcaaatcatcgatacc
tggcaagcagatgccgtccgggataccaaaaccctctctggtggcgaaagtttcctcgtt
agccttgcactcgcactggcgctgtctgatcttgtgagtaacaagacccagatagaatcc
ctattccttgatgaaggctttggtactcttgatccggaaacccttaatatcgctctggat
gctttggatcacttgaatgcgtcgggaaaaacaattggggtcatcagccatgttgaagca
atgaaagaacgtattcctgttcagatcaaagtagaaaaagtaaatggcttgggggttagt
agactggcatcagaatttcgggtttaa
DBGET
integrated database retrieval system
