Xenorhabdus bovienii CS03: XBW1_2483
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Entry
XBW1_2483 CDS
T03845
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv03030
DNA replication
xbv03430
Mismatch repair
xbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XBW1_2483 (holB)
03430 Mismatch repair
XBW1_2483 (holB)
03440 Homologous recombination
XBW1_2483 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xbv03032
]
XBW1_2483 (holB)
03400 DNA repair and recombination proteins [BR:
xbv03400
]
XBW1_2483 (holB)
Enzymes [BR:
xbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XBW1_2483 (holB)
DNA replication proteins [BR:
xbv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XBW1_2483 (holB)
DNA repair and recombination proteins [BR:
xbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XBW1_2483 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
Caps_syn_GfcC_N
Motif
Other DBs
NCBI-ProteinID:
CDM89840
UniProt:
A0A0B6X8H8
LinkDB
All DBs
Position
complement(2358655..2359644)
Genome browser
AA seq
329 aa
AA seq
DB search
MNWYPWLNHAYRLLIESHQQERGHHALLLHAHDGTGADALLYGLSRWLMCQDKQGMKSCG
KCHGCHLMLAETHSDWHVLAPEKGKSTIGVDAVRQLNERLYEYSQQGGAKIIWLPSAESL
TDAASNALLKTLEEPPQNTYFLLQCQRPARLLATLRSRCFYYFLPVPEQHVGLYWLQHQL
PAISSLDAQTALKLSQGAPLAAEQLLQTEKWQQRNVFCQAIEQALYNCDTLSLLPLLNRD
DAQQSLYWLVSLLSDAVKWQQQAQDYCVNQDQQALIHHLASTQSVEKLLSTVDDWVHCRH
QLLSVVGINRELLLTGQLLNWEKQLCPTR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaactggtatccgtggcttaaccatgcatatcgcctgttgattgaatcccatcagcag
gagcgtgggcaccatgcccttttgcttcatgctcatgatggaacgggtgccgatgcgtta
ttgtatggattgagccgctggttgatgtgtcaggacaaacaaggaatgaaaagttgtggc
aagtgtcacggctgtcatctgatgttggcagaaacgcattctgactggcatgttcttgcc
cctgaaaagggaaaaagtactattggagttgatgctgtacgtcagctcaacgaaagactt
tacgaatattctcaacaaggtggcgctaaaattatctggctaccctctgcggagtctctg
accgatgctgcttccaacgccttgctaaaaacattggaagaaccccctcaaaatacctat
tttttgttgcagtgccagcgtccagcgcgtttgctggcaacgctgcgcagtcgctgcttt
tactattttctgcctgtgcctgaacagcatgtagggctttattggctgcaacatcaactc
cctgcaatatcatcgctggatgcgcagacggcgttaaaactttcacagggtgcgcctctt
gctgctgaacagttgcttcagactgaaaaatggcagcagagaaatgtgttttgtcaggca
attgaacaggcattgtataactgtgataccctgtcacttttaccattattgaatcgtgat
gatgcacagcaatctttgtattggctggttagcttgttatccgatgctgtgaaatggcag
cagcaggcgcaggattactgcgtcaaccaagatcagcaggctttgatccatcatctggct
tccactcaaagtgtggaaaaattattaagtacagttgatgattgggtacattgtcgtcat
caattactatctgtggtgggcatcaatcgggaattattgttgacaggacaattactcaat
tgggaaaagcagctttgtcccacacggtaa
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