Xenorhabdus bovienii CS03: XBW1_3446
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Entry
XBW1_3446 CDS
T03845
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XBW1_3446 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xbv03019
]
XBW1_3446 (rhlE)
Enzymes [BR:
xbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
XBW1_3446 (rhlE)
Messenger RNA biogenesis [BR:
xbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
XBW1_3446 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
HI1480
DsrH
HEM4
Motif
Other DBs
NCBI-ProteinID:
CDM90803
UniProt:
A0A0B6XDF9
LinkDB
All DBs
Position
complement(3267589..3268947)
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AA seq
452 aa
AA seq
DB search
MNFESLGLKADILRAVEEQGYVEPTPIQQQAIPVVLSGKDLLASAQTGTGKTAGFTLPIL
QLLSESPAQAKGRRPVRALILTPTRELAAQVGENVCNYSKYLRLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSHVEILILDEADRMLDMGFIHDIRRVLSKLPAK
RQNLLFSATFSDDIKSLANKLLRDPVSIEVARRNSASEQIDQAVHFVDKKRKGELLSHMI
GNQNWQQVLVFTRTKHGANRLAEQLSQDGVTAAAIHGNKSQGARTRALADFKSGRIRALV
ATDIAARGLDIDQLPHVVNFELPNVAEDYVHRIGRTGRAEATGQAISLVCVDEHKLLHDI
ERLLKREIPRIAISGYDPDPSIKAEPILNGSNSRGSQRGNGRQSPSNQGSTKPSRSSQNR
SSQGSAKQNSDRPRSKGAPSRQGWPRTSSKAN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgagtcactcggcttgaaggctgatattttacgtgccgttgaagaacaaggt
tacgtggaacccacccctattcagcagcaagccatacctgttgtgttgtccggtaaagat
cttttggctagtgcccagacgggaacggggaaaacggcagggtttactttgccaattttg
caattactgagtgaatctccggctcaggcaaaaggtcgtcgtccggtcagggcgctgatt
ttgacaccgacccgtgagctggcggctcaagtgggtgaaaatgtatgcaattacagtaaa
tatctcagattgcgttcactggttgtatttggtggtgtcagcattaatccacaaatgatg
aaattacgtggtggtgtcgatattctcgtggcaactccggggcgtctgttggatttagaa
caccagaatgcggtggacttatcccatgttgaaatccttattttggatgaagccgaccgc
atgttggacatgggctttattcatgacattcgtcgggtattgagcaaattgcccgcaaaa
cgccagaatttactgttttcggcgaccttttccgatgatatcaagagccttgccaataaa
ctgctgcgtgatccggtgagcatagaagttgcccgtcgtaattcggcttctgaacaaatc
gatcaagctgttcattttgtggataaaaaacgtaagggagaattgctctctcatatgata
ggcaaccagaactggcagcaggtattggtctttacccgcaccaaacatggcgcaaaccgt
ctggcggaacagctcagtcaagatggtgtcactgctgccgcgattcatggtaataaaagc
cagggagccagaacccgtgcgctggccgatttcaagtcaggccggatacgcgcgctggtg
gcgacagatattgctgcccgtggattggatatcgatcagctgccccacgtcgttaacttt
gaattgcctaatgttgcggaagattacgtacatcgtattggtcgtacaggccgtgcggaa
gcgacaggacaggcaatatcgctggtttgtgtcgatgagcacaaactcctgcacgatatt
gaacgattgctgaagcgtgaaattccacgtattgcgatttcgggttatgaccctgatcct
tccattaaagctgagcccattctgaacggaagtaattcccgtggcagtcagcgtggcaac
ggcagacaaagcccttccaatcagggtagtaccaagccgagccgttccagccagaaccgt
tctagccaaggcagtgccaaacaaaacagtgatcgtccgcgtagtaaaggtgcaccatcg
cgacagggctggccgcgtacttcatccaaagcaaactag
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