Xenorhabdus bovienii CS03: XBW1_3909
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Entry
XBW1_3909 CDS
T03845
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv00470
D-Amino acid metabolism
xbv00550
Peptidoglycan biosynthesis
xbv01100
Metabolic pathways
xbv01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XBW1_3909 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XBW1_3909 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
XBW1_3909 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xbv01011
]
XBW1_3909 (ddl)
Enzymes [BR:
xbv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
XBW1_3909 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
xbv01011
]
Precursor biosynthesis
Amino acid ligase
XBW1_3909 (ddl)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATPgrasp_ST
ATPgrasp_Ter
RimK
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
CDM91265
UniProt:
A0A0B6XCJ8
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All DBs
Position
complement(3793464..3794399)
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AA seq
311 aa
AA seq
DB search
MRESIMVEKVAVLLGGTSAEREVSLQSGQSVVAGLKEAGINAYSVDTKDFDVTKLKGEGF
SKAFIALHGRGGEDGTLQGVLEFLQIPYTGSGVMASALSMDKLRTKQLWQGAKLPVSPYA
VINAQKFEQVNDFQLQEYVRELELPLMVKPNLEGSSVGMTKVNDYSELRGALELAFQYDT
DVLVEKWLFGPEYTVAFLGDEILPSIRIQAPEVFYDYDAKYLSNETKYFCPSGLSAEKEQ
ELAEIASRAYKALGCSGWGRVDIMDDGNGNFYLLEVNTSPGMTSHSLVPMAARQSGLSFS
QLVVKILELAD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagcatcatggttgagaaggtcgctgttctattgggcggaacatccgctgag
cgggaagtttcactgcaatcaggacaatctgttgtggctgggctgaaagaagcaggcatt
aatgcgtattcagtcgatacaaaagactttgatgtgactaaactcaaaggagaagggttc
agcaaagccttcatcgctctgcatgggcgtggtggtgaagatggtacgctgcaaggggta
ctggagtttttgcagatcccttataccggcagtggtgttatggcatcagctttgtcaatg
gacaaattgcgtacaaaacagttatggcagggagcaaagttgccggtttctccgtatgcc
gtaattaatgctcaaaaatttgaacaagttaatgattttcaactccaagaatatgttcga
gaattagagcttccattaatggtgaagccgaatctggaaggctccagtgttggcatgact
aaagtgaatgattattccgaactgcgcggggcattggaactggcgttccagtacgacacg
gatgtgctggttgaaaaatggttgtttggtcctgaatataccgtggcattcttgggcgat
gagattttaccctctatccgtatccaagcgccggaagtgttttatgattacgatgcgaaa
tatctttccaatgaaacgaaatatttctgcccaagtggcttgagcgcggaaaaagaacag
gaactggcagagattgcatcaagagcgtataaggcgctggggtgcagtggctggggtcgg
gttgatatcatggatgatggcaatggtaatttctatctgctggaagtgaatacatctcca
ggtatgaccagccatagtctagtaccgatggccgcacgtcagtccggactcagtttttca
caactcgtggtgaaaattctggagttggccgattga
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