Xenorhabdus bovienii CS03: XBW1_4041
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Entry
XBW1_4041 CDS
T03845
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xbv
Xenorhabdus bovienii CS03
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xbv03016
]
XBW1_4041 (truD)
Enzymes [BR:
xbv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
XBW1_4041 (truD)
Transfer RNA biogenesis [BR:
xbv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XBW1_4041 (truD)
Prokaryotic type
XBW1_4041 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CDM91397
UniProt:
A0A0B6XC21
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All DBs
Position
complement(3926116..3927165)
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AA seq
349 aa
AA seq
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MTLSELHWLYGQPEATGVVKASPEDFIVREDLGFSPDGEGEHLMIHIRKIGCNTQFVADY
LARFAKIPARSVSYAGLKDRNAVTEQWFCVHLPGKQDPDLTAFQLEGCEVLTTSRQKRKL
RIGALKGNDFTLVLRQISDRQSVEKRLQQIAQAGVPNYFGEQRFGRDGQNLVQAQRWADN
EIQVKERSRRSFYLSASRSAMFNTIASLRIAQDTHQQVLNGDALQLTGRGSWFVADELEL
PVLQQRIMDGELQITAPLPGDKALGTQHQALDFEQHCLLDYASLWSLVKRERVESVRRAI
LVQPLNLNWEWLDERTVTLHFSLPSGSFATSVVRELINQDQNNAADIAQ
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacattaagtgaattacactggctttatgggcagccagaagcgactggcgtagttaaa
gcctcaccagaagattttattgttcgtgaagatttaggattttctcctgatggagaaggc
gaacatttaatgatacatatccgcaagataggatgtaacacccagtttgttgctgattac
cttgctcgttttgccaaaataccggcgcgctctgtcagttacgcgggattaaaagaccgt
aacgcagtcacagagcagtggttttgcgtgcatctgccaggaaaacaagatccggattta
actgcgttccagctggaaggatgtgaagttttgaccacttctcgccaaaaacgcaaacta
cggattggtgccttgaagggtaatgatttcactcttgtattgaggcaaatttctgacagg
caatctgtggaaaaacgcttgcagcagattgcacaggcaggtgtgccgaattattttggt
gaacagcgtttcgggcgggatgggcaaaatcttgttcaggcgcagcgctgggcggataat
gaaatccaggtcaaagaacgcagccgccgcagtttttacctttctgccagccgcagtgcc
atgtttaataccattgccagtctgcggatcgctcaggatacgcaccagcaggtattgaac
ggggatgccctacagctaacgggacgaggtagctggtttgttgcagatgaacttgaactg
cctgtattacagcaacgaatcatggatggtgaattgcagataacagcacctttgcctggc
gacaaagcgctgggtactcagcatcaggcattggatttcgaacagcattgcctgttagat
tacgcatcactatggtcattggtcaaacgtgaacgcgtggaaagtgtgcgtagggcaatc
ttggtgcaaccactcaatctgaactgggaatggttggatgagcgaaccgtcaccctccat
ttctcactgccatcaggcagttttgcaaccagtgtcgtcagagaacttatcaatcaggat
caaaataatgctgcggatattgctcagtaa
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