Xenorhabdus bovienii CS03: XBW1_4065
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Entry
XBW1_4065 CDS
T03845
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase]
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv00071
Fatty acid degradation
xbv00280
Valine, leucine and isoleucine degradation
xbv00310
Lysine degradation
xbv00362
Benzoate degradation
xbv00380
Tryptophan metabolism
xbv00410
beta-Alanine metabolism
xbv00640
Propanoate metabolism
xbv00650
Butanoate metabolism
xbv00907
Pinene, camphor and geraniol degradation
xbv00930
Caprolactam degradation
xbv01100
Metabolic pathways
xbv01110
Biosynthesis of secondary metabolites
xbv01120
Microbial metabolism in diverse environments
xbv01200
Carbon metabolism
xbv01212
Fatty acid metabolism
Module
xbv_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
XBW1_4065 (fadB)
00650 Butanoate metabolism
XBW1_4065 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
XBW1_4065 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XBW1_4065 (fadB)
00310 Lysine degradation
XBW1_4065 (fadB)
00380 Tryptophan metabolism
XBW1_4065 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
XBW1_4065 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
XBW1_4065 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XBW1_4065 (fadB)
00930 Caprolactam degradation
XBW1_4065 (fadB)
Enzymes [BR:
xbv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
XBW1_4065 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
XBW1_4065 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
XBW1_4065 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
XBW1_4065 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
CDM91418
UniProt:
A0A0B6XF13
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All DBs
Position
3952860..3955046
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AA seq
728 aa
AA seq
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MLYLSDTIQVNWLKDGIAELIFNAPAAINKLDTKTVASLDKAVAVLEQQTELKGLLLRSE
KQAFIVGADITEFLSLFDAPKEKLQEWLKFANDIFNCIEDLPVPTISAINGYALGGGCEV
VLSTDFRVASPDLRIGLPETKLGIMPGFGGSVRLPRLIGPDNALEIITAGKDIGAEDALK
NGLVDAVVPTEKLVDAAVSILEQAIKGDLDWQAARQPKLSPLNLNDVERTMSFTVAKGMV
MKVAGPHYPAPITAVKTIEKAATLGRDEALKLEAESFVPLAHTNVARALVGIFLNDQYVK
GLAKKHLKEVTVPQHATVLGAGIMGGGIAYQSARKGVPVLMKDINQKALDLGVNEAAKLL
HKQFERGRLDAMKMAKILSSIQPTLSYAGIEQSQIVVEAVVENPKIKAAVLAETESHIND
DCILASNTSTIPITELAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDKTISTVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLLRDGGDFRQIDKIMEKEFGWPMGPAYL
IDVVGIDTAHHAQAVMAQGFPERMTRDYHDAIDVLFENQRYGQKNDVGFYKYTQDKKGKP
KKEQDETVDQLLAGISQPKQVFSGEDIIARTMIPMINEVVRCLEEGVIASPAEADMALVY
GLGFPPFHGGVFRYLDTMGTAAYVKLAERYAHLGAMYHVPAGLKAKSESNESYYPVAAKI
AVNPGEKA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctacctaagtgacactattcaagtaaactggctgaaagatggcattgcagaactg
atcttcaatgcaccagctgcaattaataaattagatacaaaaaccgttgcttcattggat
aaagcggttgccgtccttgagcaacaaactgaattaaaagggctgttactacgttctgaa
aaacaagcctttattgttggggcagacatcacagaattcttatcattattcgatgcacca
aaagaaaaacttcaggaatggctgaagttcgccaatgatattttcaactgtattgaagat
ctccctgttcctactatttctgcgatcaacggctatgcacttggcggtggttgtgaggta
gtattgtcaactgactttcgtgttgcatccccagatcttcgcatcggattaccagaaact
aaattaggtattatgccgggctttggtggttctgttcgcctgccacgtttaattggccca
gataacgctctcgaaattattacagctggcaaagatattggtgcagaagacgcgctaaaa
aatggcctagttgacgccgttgtgccgactgaaaagctggtagatgctgctgtttctatt
ctggaacaggccatcaaaggcgatctggattggcaagccgcccgccaacctaaactttcc
ccactgaacctcaatgatgttgaacgcaccatgagcttcaccgtggcgaaaggaatggtg
atgaaagtcgcaggcccacactatccagcgccaattactgctgtaaaaactattgaaaaa
gcagcgacattgggtcgtgatgaagccttgaaactagaagcagaaagttttgttccactg
gctcataccaatgttgcccgtgccttggtcggcatcttcctgaatgaccaatatgtcaaa
ggtctggcgaaaaaacatctgaaagaagtcacagtgccacagcatgcaacggtactgggt
gcaggtatcatgggtggtggtatcgcctatcaatctgcacgcaaaggcgttcctgttctg
atgaaagacattaatcagaaagcgctggatttaggagtcaatgaagccgctaagttattg
cataagcaatttgagcgtgggcgtctggatgctatgaaaatggctaagattctgtcatcc
attcaaccaacactcagttatgcgggcattgagcaatctcagattgttgtcgaagccgtt
gttgagaatccgaagattaaagctgcggtcttggcagaaacagaatcacatatcaacgat
gattgcattctagcctccaatacctccacaatcccaatcactgaattagcaaagtcactg
aaacggccagaaaatttctgtggtatgcattttttcaacccagttcaccgtatgccgctg
gttgaaatcatccgtggagaaaaaacctcagacaagaccatttctactgttgtggcttac
gccagcaaaatgggtaaaacgccgattgttgtcaatgattgcccaggctttttcgtcaac
cgcgtattgttcccttatctggcaggcttcggcatgttactgcgcgatggcggtgatttc
cgtcaaatcgacaagatcatggagaaagagtttggctggccgatgggtcctgcatatctc
atcgacgttgttggcattgataccgcccatcatgctcaggcggtcatggcacaaggtttt
ccagagcgcatgactcgcgattatcacgatgccattgatgtattatttgaaaatcagcgt
tacggccagaaaaatgacgtgggtttctataaatacactcaagacaaaaaaggcaagccg
aaaaaagagcaggatgaaaccgtcgatcaactgctagcaggtatcagtcaaccgaaacag
gttttctctggcgaagatatcattgcccgtaccatgatcccgatgattaacgaagttgtt
cgctgcttggaagaaggtgtcattgccagtcctgcggaagcagatatggcgctggtttat
ggtttaggcttcccgccattccacggtggtgttttccgctatctggatacgatgggaacc
gcagcttatgtgaaactggctgaacgttatgcccacttaggcgcaatgtatcacgttccc
gctggcctgaaagcgaaatccgaaagcaatgaaagttactaccctgtcgcagccaaaatt
gctgttaatccaggtgaaaaagcgtga
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