Xenorhabdus bovienii CS03: XBW1_4206
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Entry
XBW1_4206 CDS
T03845
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XBW1_4206 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbv03400
]
XBW1_4206 (recD)
Enzymes [BR:
xbv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XBW1_4206 (recD)
DNA repair and recombination proteins [BR:
xbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XBW1_4206 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_11
UvrD-helicase
SH3_13
SLFN-g3_helicase
AAA_22
AAA_16
PhoH
nSTAND3
DEAD
CbiA
UvrD_C
SRP54
Flagellin_IN
AAA_28
ResIII
DO-GTPase1
NPHP3_N
AAA_14
MukB
DUF87
AAA
NTPase_1
AAA_24
ATPase
Motif
Other DBs
NCBI-ProteinID:
CDM91555
UniProt:
A0A0B6XDA0
LinkDB
All DBs
Position
complement(4096292..4098199)
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AA seq
635 aa
AA seq
DB search
MSDMKLLLQQAVAQKLLRPLDVQFAYAMIENGDPLLLLVMALVSAESGAGHVCLPLERIS
PEYLFEGRQPELAALLWSSAGKPNQQQVISALQACPAVSTGESPAPIILSRQALSDYRIY
MQRMWQSERRVAEFFSSVEFSDDIDEVQLRRILDELFGVTAEGEIDWQKVAAAVAVTSRI
SVISGGPGTGKTTTVAKLLAALIKLNEGKTLSIQLAAPTGKAAARLTESLSEAVDKLALT
SQQSNSIPEQAQTIHRLLGAQPDSQKLRYHRDNPLSLDILIIDEASMVDLPMMARLIEAL
PPRAKVIFLGDKDQLASVEAGAVLGDICRFAEQGYSTKRAEQLSQLTGCQLTSYSMPDSG
EHALAVRDCLCLLRKSYRFNSASGIGQLASAVNQGSSAGVSAVLSRSLPDVHFNPLSGDE
DYQRLLTQTAEGYYRYLAMVNEQAADKDILAEFNRFRLLCALREGPFGVSGLNQRVEQLL
HRKGVISLPRNAESRGYAGRPIMILRNDSTLGLFNGDIGIMLRNKDNELKAHFQLSDGTI
KPFQPSRLPQHETAYVMTVHKSQGSEFEHTALVLPTQFSPVVSRELVYTALTRAREKLTL
YAYKPVLDKAVGTSTQRRSGLAEWLKPQGKCQSGQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacatgaaattattgttgcagcaagccgttgcccaaaaattactgcgtccgctg
gatgtgcagtttgcctatgcgatgattgaaaacggagatcctctgttattgctggttatg
gcattggtgagtgcggaatcgggagcagggcatgtctgcctgccattagagcggatctcg
cctgaatatttatttgaggggcggcagcctgaattggcagcattgctctggtcttcggcg
gggaagccaaatcaacagcaagttatttcagctttacaagcctgtcccgcagtgagcacc
ggagaatctcctgccccgatcattctttcccgccaggctctttctgattatcgtatttac
atgcaacgcatgtggcaaagtgagcgtcgggtcgcggagtttttttcgtcggtagaattt
tctgatgatattgatgaagtgcagttacgtcgcattttggatgaactttttggtgtgacc
gccgaaggggaaatagactggcagaaagtggcggcagcagttgctgtaaccagccgtatt
tccgtgatctctggcgggccagggacaggaaaaacgacgacggtagctaagttgctggcc
gccttgatcaaactgaatgaaggcaaaacactgagcattcaattggcggcgcccactggc
aaagcggccgccagattgactgaatcgctgagtgaggcagtagataaactggctttaaca
tcacaacaatcgaatagcattcctgagcaggcgcaaacgattcatcgcctgttgggagcg
cagccagatagtcaaaaactgcgttatcaccgcgataatccgctatctcttgatattttg
atcatcgatgaagcctcaatggtggacttaccgatgatggcacgtttgatagaagccctg
ccgccacgggcaaaagtgattttcctgggggataaagatcagttggcctcggttgaagcg
ggagccgtattgggggatatttgccgctttgctgaacaaggttatagcaccaagcgtgct
gaacaattgagtcagttgacaggctgtcagttaacatcgtattcaatgcctgattctgga
gaacatgcactggcagtccgtgattgtttatgtctgttgcgtaaaagctatcgtttcaac
tcggcttcgggtatcgggcaattggcatcggcggttaatcaggggagtagtgcgggggta
tctgccgtattaagtcggtctttgcctgacgttcacttcaatcctctttcaggagatgaa
gattatcagcgtttactgacgcaaactgcagaaggttactaccgttatttagcgatggtg
aacgaacaggcggctgacaaagatattttggcagaatttaaccgtttcaggttgttgtgt
gctttgagggaagggccgtttggtgtcagcggcttgaaccagcgggtagagcaattgtta
caccgtaaaggcgtcatttctctacccagaaatgcagagagccgtggctatgctggacga
cccattatgatcttgcgtaacgacagtacactggggctatttaatggtgacatcggtatt
atgctcaggaataaggataatgagctgaaagcccatttccagctatctgatgggacgata
aagccatttcagccgagccgattgcctcagcatgaaacggcctatgtgatgactgtccat
aaatcccaaggttctgagtttgaacacaccgcgttagtcttgccgactcagttctcgcca
gttgtcagccgggaactggtgtacacagccttaacccgcgcccgtgaaaaattgacgctt
tacgcatataaacccgtcttggataaggcggtgggtacatcaacacagcggcgtagtggc
ttggcagaatggctcaagccacagggaaagtgccagtcaggtcagtga
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