Xenorhabdus bovienii CS03: XBW1_4410
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Entry
XBW1_4410 CDS
T03845
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XBW1_4410 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xbv03019
]
XBW1_4410 (pnp)
03016 Transfer RNA biogenesis [BR:
xbv03016
]
XBW1_4410 (pnp)
Enzymes [BR:
xbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
XBW1_4410 (pnp)
Messenger RNA biogenesis [BR:
xbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
XBW1_4410 (pnp)
Transfer RNA biogenesis [BR:
xbv03016
]
Prokaryotic type
tRNA degradation factors
XBW1_4410 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
OB_RRP5_4th
OB_PDCD11
KH_SLS1_2
KH-I_KHDC4-BBP
aRib
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
CDM91759
UniProt:
A0A0B6XGD9
LinkDB
All DBs
Position
complement(4280479..4282623)
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AA seq
714 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTIETGMMARQATAAVMVNMDDTAVFVTVVGQKKMKAGQNFFPLT
VNYQERTYAAGRIPGSFFRREGRPGEGETLVARLIDRPLRPLFPEGFLNEVQIIATVVSV
NPLVNPDIVAMIGASAALALSGIPFNGPIGAARVGYINDQYVLNPTSDELKNSRLDLVVA
GTAGAVLMVESEAELLTEEQMLGAVVFGHEQQQIVIDHINALVAETGKDKWDWAPESINQ
PLHDRVAELAESRLGDAYRITEKQERYAQVNAIKEEVSAIIVTEAAEKGVELEGSEVLDV
LSVLEKNVVRGRVLRGEPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVAATL
GTERDAQVIDELMGERADRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMP
TANEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFV
VLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITSEIMQVALNQAKGARLHILGV
MEQAIQSPRNDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVK
IAATDSDKAHHAIRRIEEITAEVEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIAD
KRVEKVTDYLQLAQEVPVKVLEIDRQGRIRLSMKEAVTNTTTDEALQSPESSVE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgattgttcgtaaattccagtatggtcagcataccgtgaccattgaaacc
ggcatgatggctcgtcaggcgacagcggccgttatggtaaatatggatgacactgcggta
tttgttaccgttgttggccagaaaaaaatgaaagcaggtcagaatttcttcccactgacc
gttaactatcaggagcgtacctacgctgctggtcgtattccaggaagtttctttcgccgt
gaaggccgtccaggtgaaggtgaaacccttgttgcccgtttgattgaccgtcctctgcgt
ccactgttcccagaaggttttctgaacgaagttcaaatcatcgcgacagttgtttctgtt
aatccactggtgaaccctgatatcgttgccatgattggtgcatccgctgcactggcactg
tcaggcattccattcaatggcccaattggtgctgcacgcgtcggttacatcaacgatcaa
tacgtgttgaacccaaccagtgatgaactgaaaaacagccgtttagatttagtggttgcg
ggtacagcaggcgcggtactgatggtcgaatctgaagcggagctgctgactgaagagcag
atgctgggtgccgttgtctttggtcacgaacagcagcagattgtgattgatcacatcaat
gcattagttgctgaaacgggtaaagataagtgggactgggcaccagaatctatcaaccag
ccactgcatgatcgcgttgctgaactggcagaaagccgtctgggtgatgcttaccgtatt
accgaaaaacaggaacgttacgctcaggttaatgccatcaaagaagaagtttctgcgatt
atcgttacagaagcagcagaaaaaggtgttgaactggaaggatcagaagttcttgacgtg
ctgtctgttctggagaaaaacgtcgttcgtggccgtgtcctgcgtggtgagcctcgcatt
gacggccgtgaaaaagacatggttcgcgcgctggacgttcgtactggtgtactgccacgt
actcacggttcatccctgttcacccgtggggagactcaggcgttggttgcagcgacactg
ggtactgagcgtgatgcccaagttattgatgaactgatgggcgagcgtgccgatcgcttc
ttgttccattataacttccctccgtactctgttggtgaaacgggtatggtcggctcacca
aaacgtcgtgaaattggtcacggtcgtctggcgaaacgtggtgttctggctgtaatgcca
accgccaacgaattcccatatactattcgcgtagtttctgaaattaccgaatctaacggt
tcttcttctatggcttctgtctgtggtgcttcactggcactgatggatgctggtgtaccc
attaaagctgcggttgctggtatcgctatgggtctggtgaaagaaggggataactttgtt
gttctgtctgatattctgggtgacgaagatcatctgggtgacatggactttaaagtcgcg
ggtagccgtgatggtatcagcgcattgcagatggatatcaaaattgaaggtatcaccagc
gaaatcatgcaggttgctctgaatcaagccaaaggtgctcgtctgcacattcttggcgtg
atggaacaggctatccaaagcccacgcaatgatatctctgaatttgcgccacgcatccac
actattaagatcaatccagacaaaatcaaagatgtgattggtaaaggcggttcagtgatc
cgtgcgctgacagaagaaactggcacaaccatcgaaatcgaagatgatggtactgtgaag
attgcagccactgacagtgataaagctcatcacgctatcagacgtatcgaagagattact
gctgaagttgaagttggccgcatttataatggtaaagtgacccgtattgttgacttcggt
gcgttcgttgctattggtggtggcaaagaaggtctggtacatatttctcagatcgcagac
aagcgtgttgagaaagtgacagactatctgcaactcgctcaggaagtgcctgtcaaggta
ctggagatcgaccgtcagggccgtattcgtctgagcatgaaagaagctgtgaccaatacc
actaccgatgaagcactacaatcaccggaatcatcagtagaataa
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