Xenorhabdus bovienii CS03: XBW1_4412
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Entry
XBW1_4412 CDS
T03845
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xbv
Xenorhabdus bovienii CS03
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xbv03016
]
XBW1_4412 (truB)
Enzymes [BR:
xbv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XBW1_4412 (truB)
Transfer RNA biogenesis [BR:
xbv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XBW1_4412 (truB)
Prokaryotic type
XBW1_4412 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
CDM91761
UniProt:
A0A0B6XF32
LinkDB
All DBs
Position
complement(4283349..4284296)
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AA seq
315 aa
AA seq
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MGRRRRGRAIHGVLLLDKPQDISSNDALQKVRRIFNASKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIARLGQRTDTSDSHGKIICEREVQITQPQLAAALDTFRGDTMQ
VPSMYSALKHQGKPLYEYARQGIEIKREARPITVYELQFIRWEGDELELEIHCSKGTYIR
TIIDDLGELLGCGAHVIYLRRLQVANYPTHRMVTLEQLHELKKQSEEQEIDAGELLDSLL
LPMDTAVAHFPVIQLASVVAAYFKQGQPVRSKHSLTSGEWVRVTEGDENKFIGIAVIDDD
GLVAPRRLVVETEQL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtcgtcgtaggggccgtgcgatacacggcgtattgctgctggataagccgcag
gatatttcctctaatgatgcgttacagaaagtaaggcggatcttcaatgccagcaaagcg
ggccatacgggcgcgctagatccactggctaccggaatgctgccaatttgccttggtgaa
gcgaccaaattttcccagttcctgctggattctgacaaacgctatcgggtaattgcccgt
ttgggacagcgcacagacacatcggattcacatggaaaaatcatttgtgaacgtgaagtg
cagatcacccagccccagcttgcagccgcattggatacattccgtggtgataccatgcag
gttccttccatgtattctgcgctgaaacatcagggaaaacctctgtatgaatatgcccgt
cagggaattgaaattaagcgggaagcgcgtccgattactgtttacgaattgcagttcatt
cgctgggaaggtgatgagctagagctggaaatacactgttccaagggaacgtatatccgt
accatcattgatgatttaggcgagctattgggctgtggtgcgcatgtgatttatctgcgc
cgtttgcaggttgccaattatcccactcatagaatggtgacactggaacagttgcatgaa
ttaaaaaaacaatctgaagagcaagagattgatgcgggagaattgctcgactcattgtta
ttgccaatggatacagcggttgcacattttccagtcattcagttggcatcagttgttgct
gcttattttaagcaggggcagccagttcgcagtaaacacagtttaacgtccggtgaatgg
gtgcgagtcaccgaaggggatgaaaacaaattcatcggcatcgcagtgattgatgatgat
ggtctggtagctccgcgtcgtctggtggtagaaacagaacaactataa
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