Xenorhabdus bovienii CS03: XBW1_4461
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Entry
XBW1_4461 CDS
T03845
Symbol
hfq
Name
(GenBank) Protein hfq
KO
K03666
host factor-I protein
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv02024
Quorum sensing
xbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XBW1_4461 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XBW1_4461 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xbv03019
]
XBW1_4461 (hfq)
03036 Chromosome and associated proteins [BR:
xbv03036
]
XBW1_4461 (hfq)
Messenger RNA biogenesis [BR:
xbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XBW1_4461 (hfq)
Chromosome and associated proteins [BR:
xbv03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
XBW1_4461 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
CDM91810
UniProt:
A0A0B6XE59
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All DBs
Position
complement(4330741..4331043)
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AA seq
100 aa
AA seq
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MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHGNNPNVTTGVGNYHAGANPAAQPESDGAE
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttgcaagatccattcctgaacgcgttacggcgtgaaagggtc
ccggtttctatttatttggtcaacggcatcaagttacagggtcagattgaatcttttgac
caatttgttattttactgaaaaacacggtcagtcagatggtttataaacatgccatttca
actgttgtgccttcccgtcctgtgtctcaccacggcaataatccgaacgtgacgactggc
gttggaaattatcatgctggcgctaacccagcagcacaaccggaaagtgatggcgctgaa
taa
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