Xenorhabdus bovienii CS03: XBW1_4504
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Entry
XBW1_4504 CDS
T03845
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv03420
Nucleotide excision repair
xbv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XBW1_4504 (uvrD)
03430 Mismatch repair
XBW1_4504 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbv03400
]
XBW1_4504 (uvrD)
Enzymes [BR:
xbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XBW1_4504 (uvrD)
DNA repair and recombination proteins [BR:
xbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XBW1_4504 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
XBW1_4504 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CDM91853
UniProt:
A0A0B6XFZ6
LinkDB
All DBs
Position
complement(4381657..4383831)
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AA seq
724 aa
AA seq
DB search
MVIMDVSYLLESLNDKQREAVTASRTNMLVLAGAGSGKTRVLVHRIAWLLSVENASPFSI
MAVTFTNKAAAEMRHRIENLIGTSQGGMWIGTFHSLAHRLLRFHHLDANLPQDFQILDSE
DQHRLIKRIIKAMNLDDKQWPARQGMWYINGKKDEGLRPQHIESYGNPVEATWLKIYQAY
QEACDRAGLVDFAELLLRAHELWLNKPQILQHYRERFTNLMVDEFQDTNSIQYAWIRLLA
GDSGKVMIVGDDDQSIYGWRGAQVENIQRFLRDFPGAETIRLEQNYRSTSNILKAANALI
AHNSDRLGKSLWTEGGEGEPIALYCAFNELDESRYVVSRIKHWLDNGGALKECAILYRSN
AQSRVLEEALLQVSMPYRIYGGQRFFERQEIKDALSYLRLVSNRYDDSAFERVVNTPTRG
IGDRTLDVVRQVARDQQKTLWESCLLLLQQKVLAGRAASALQRFIELIDALETETQEMPL
HVQTDRIIRDSGLWAMYQQEKGEKAQARIENLEELVTATRQFSYKDEDENLMPLQAFLSH
AALEAGEGQADVYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR
LAYVGVTRAMQKLTLTYAETRRLYGKSVYHRPSRFVGELPTECVAEVRLRATVSRPVSHK
QLGTPISADDSGYALGQRVRHPKFGEGTVINIEGSGEHCRLQIAFQGEGIKWLVAAYARL
ETGQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggtaattatggacgtttcttatctgctcgaaagcctgaatgataaacaacgcgaagct
gttacggcatcgcgtaccaatatgctggtgctggccggggctggcagtggcaaaacgcgc
gtgctggttcaccggatcgcctggttactgtcagttgaaaatgcgtcacctttttccatc
atggcggtgacttttaccaataaggcagcggctgaaatgcgccatcggattgaaaacctg
attggcaccagccaagggggaatgtggataggaacattccatagtctggctcatcgcctg
ctgcgtttccatcaccttgacgccaatctgccgcaggatttccagatcctcgatagtgaa
gatcaacaccgactgatcaagcgtatcatcaaggcgatgaatctggatgacaaacagtgg
ccagcccgtcagggcatgtggtacatcaacggtaaaaaagatgaaggattgcgccctcag
catatcgaaagctacggcaatccggtagaagcgacatggctgaaaatttaccaagcctat
caggaagcgtgtgaccgcgccggattggtggattttgctgaattactgctgcgtgctcat
gaattgtggctgaacaaaccgcagatcctgcaacattatcgtgagcgcttcactaatctt
atggtggatgaatttcaggacaccaacagtattcaatacgcttggatccgcctgctggca
ggggatagcggcaaggtgatgattgtcggcgatgatgaccagtcgatttacggctggcgt
ggggcgcaggtggaaaatatccagcgttttctcagggattttcccggcgcagaaaccatt
cgcctggaacagaattatcgctccaccagtaatatcctcaaagcggctaacgccctgatc
gctcataacagcgaccgattgggtaagagtctgtggacagaaggcggggaaggcgagccg
attgcactttactgtgctttcaatgagctggatgagtcgcgttatgtcgtcagccgtatc
aaacattggttggacaacggtggcgcactgaaagagtgtgcgatcctgtatcgcagcaat
gcccagtcccgcgtactggaagaggcgttattgcaggtctccatgccttaccgcatttat
ggcggccagcgcttcttcgaacgtcaggaaatcaaggatgctttgtcttacctacgttta
gtatcgaaccgttatgatgattccgccttcgagcgcgtggtcaacacgccgacgcggggt
atcggagatagaacgctcgatgttgtgcgtcaagtggcgcgtgatcagcagaaaacgcta
tgggaaagctgtctgctgttgcttcagcaaaaagtgttggcggggcgtgctgcatccgca
ttgcagcgtttcattgaattgattgacgcgttggaaacggaaacgcaggagatgccgctg
cacgtacagaccgaccgcattatccgtgactccggcctgtgggcgatgtatcagcaggaa
aaaggcgaaaaagcacaggcgcgtatcgaaaaccttgaagaactggttactgcgacccgc
cagttcagttataaggatgaagatgaaaacttgatgccattgcaggcctttctgtcccat
gcggcactcgaagcgggggaagggcaggcggatgtttatcaggatgccgtacagttgatg
accttgcactctgcgaaagggctggaatttccgcaagttttcatcgtcggcatggaagag
ggaatgttccccagccaaatgtctcttgacgaaggcgggcgattggaagaagaacgtcgt
ttggcctacgtgggcgtgacaagggcgatgcaaaaactgacactgacctatgccgaaacc
cgtcgtttatatggcaagtcagtgtatcatcgcccgtctcgttttgtcggggaattgccg
acggaatgtgttgctgaagttcgcctgcgggcaaccgtatcacgtccggtcagccataag
cagctgggaacacctatcagtgccgacgacagtggttacgcacttggtcagcgtgtacgt
catccgaaatttggtgaagggacagttatcaatatagaaggcagtggagaacattgccgc
ctgcaaatcgcgtttcaaggtgaaggtatcaagtggctggttgccgcttatgccaggctt
gaaacaggccaataa
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