Xanthomonas campestris pv. campestris B100: xcc-b100_0940
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Entry
xcc-b100_0940 CDS
T00759
Symbol
kdgD
Name
(GenBank) 5-dehydro-4-deoxyglucarate dehydratase
KO
K01707
5-dehydro-4-deoxyglucarate dehydratase [EC:
4.2.1.41
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Pathway
xca00053
Ascorbate and aldarate metabolism
xca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
xcc-b100_0940 (kdgD)
Enzymes [BR:
xca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.41 5-dehydro-4-deoxyglucarate dehydratase
xcc-b100_0940 (kdgD)
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GFIT
Motif
Pfam:
DHDPS
Motif
Other DBs
NCBI-ProteinID:
CAP50288
UniProt:
B0RPA3
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All DBs
Position
1077786..1078703
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AA seq
305 aa
AA seq
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MSSRYTPSEMAQALGAGLLSFPVTHFDADMAFDEPAYRSNLDWLSSHPAAGLFAAGGTGE
LFSLTLDEVDRAVRAAVTQTAGRMPVIAPAGYGTAIAVAMAQAAERNDADGILLFPPYLT
ECDADGVAEHVERVCKATSLGVIVYGRANARLDDVALARVAERCPNLVGYKDGIGDVERM
TRIYARLGDRLLYVGGLPTAETFALPYLEMGVTTYSSAIFNFLPEWALSFYAAVRARDHA
TIYRELNDFVLPYTVLRNRRAGYAVSIVKAGMRAVGRPAGPVRTPLADLTEDEFAQLTQL
IGGRR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagatacacaccttcggaaatggcccaagcgcttggtgccgggctcctgtca
ttcccggtgacgcacttcgatgcggacatggctttcgacgagcccgcctaccgcagcaat
ctggactggctgtcctcgcacccggccgccgggttgtttgctgccggcggcaccggcgag
ctgttttcgctgaccctggacgaagtggaccgcgcagtgcgcgcggccgtgacccagacc
gccgggcgcatgccggtgattgcgccggccggctacggcaccgcgattgccgtggccatg
gcgcaggcggcagagcgtaacgacgccgatggcatcttgctgtttccgccgtatctcacc
gaatgcgatgccgacggcgtggccgagcatgtcgagcgcgtctgcaaggcgacctcgctg
ggcgtgattgtctacggccgcgccaatgcccggctcgatgacgtggcgctggcgcgggtg
gccgagcgctgccccaacctggtgggctacaaggacggcatcggcgatgtggagcgcatg
acgcgtatctacgcgcggctgggcgatcgcctgctctacgtcggcggcctgccgacggcc
gaaacctttgcgctgccgtacctggaaatgggggtgaccacgtattcgtcggccatcttc
aatttcctgccggaatgggcgctgtcgttctatgcggcagtgcgcgcgcgcgatcacgca
accatctaccgcgagctcaacgacttcgtgctgccgtacaccgtgctgcgcaatcgccgc
gccggctatgcggtgtcgatcgtcaaggccggcatgcgtgccgtgggtcgcccggccggc
ccggtacgtacgccgctggccgatctgaccgaagacgaattcgcccagctcacgcagctc
atcggagggcgccgctga
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