Xanthomonas campestris pv. campestris B100: xcc-b100_1140
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Entry
xcc-b100_1140 CDS
T00759
Name
(GenBank) Putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Pathway
xca00300
Lysine biosynthesis
xca00470
D-Amino acid metabolism
xca01100
Metabolic pathways
xca01110
Biosynthesis of secondary metabolites
xca01120
Microbial metabolism in diverse environments
xca01230
Biosynthesis of amino acids
Module
xca_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
xcc-b100_1140
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
xcc-b100_1140
Enzymes [BR:
xca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
xcc-b100_1140
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Ortholog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6401
NCAB2
NACHT_N
Motif
Other DBs
NCBI-ProteinID:
CAP50488
UniProt:
B0RPV3
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All DBs
Position
complement(1305961..1307244)
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AA seq
427 aa
AA seq
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MSLQIDATAVRAAVAQLRAHSDAPLCAYVYDLAALDAHAAWMRAQLPPGCTLFYAAKANA
EPQILQTLAPYVDGFEAASGGELAWLHQQQPDAALLFGGPGKLESELAQAVRLPDCTVHV
ESLGELQRLAAIARQIAQPDRRRIPVFLRMNIAVPGAQTTRLMMGGQPSPFGLDPDDLDA
ALLQLRASPALELRGFHFHLMSHQRDAAAQLHLIAAYLRTVQHWRQRHGLGPLLVNAGGG
FGVDYLTPEASFDWAGFCAGLPAVLHAHGDGLQLRLEPGRYVSASCGWYLMEVLDIKRSH
GAWFAIARGGTHHFRTPAAQGHDHPCVVVRGTHAPVLRDTPVTLVGQLCTPKDVLARNQR
VAALAPGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFLPVHAQATATTGTRMSARRSASA
TVSGSSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcagatcgatgccacggcggtgcgcgcagcggtggcgcagttacgtgcgcac
agcgacgccccgctatgtgcctacgtctacgacctggccgcactggatgcgcacgcagca
tggatgcgtgcgcagctgccgcccggctgcacgctgttctacgccgccaaggccaatgcc
gaaccgcagatcctgcagacgctggcgccgtacgtggatgggttcgaagccgcatccggt
ggcgagctcgcctggctgcaccagcagcaaccggatgcggcgttgctgtttggtgggccg
ggcaaactggagagcgaactggcgcaggccgtgcgcctgcccgactgcaccgtgcatgtg
gaaagcctgggcgaattgcagcggctggcggccattgcgcgacagatcgcccagcccgac
cgccggcgcatcccggtgttcctgcgcatgaacatcgccgtgcccggtgcacagaccacg
cgtttgatgatgggcggccaaccatcgccattcgggctggacccggacgacctggatgct
gcgctgctgcagctacgcgccagcccggcactggagttgcgcggcttccatttccacctg
atgtcgcaccaacgcgacgccgccgcgcagctgcacctgatcgcggcgtatctgcgcacc
gtgcagcactggcggcagcgccatggcctgggcccgctgctggtcaatgccggcggcggc
ttcggcgtggactatctgacgccagaggcctcgttcgactgggcaggcttctgcgccggg
ctgcccgcggtgctgcacgcgcacggcgacggcctgcaactgcgcctggaaccgggccgc
tatgtcagcgccagctgcggctggtacctgatggaggtgctggacatcaagcgcagccac
ggcgcgtggtttgcgattgcccgtggcggcacccatcacttccgcacgccggccgcgcaa
ggccacgaccatccctgcgtggtggtacgcggcacacatgcaccggtgctgcgcgacacc
ccggtcaccctggtcggccagctctgcacgcccaaggatgtactggcccgcaatcagcgc
gttgcagcgctcgctcccggcgactgcctggccttcccgctggcgggtgcgtatgcgtgg
aatatttcgcatcagcagttcctgatgcacccgccaccgcagatggtgtttttgccggta
cacgctcaggcaaccgccaccaccggcacgcggatgtcggcgcgcaggtcggcttcggcc
acggtctcggggtcgtcgaggtag
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